RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 CHSY1Q86X52 802 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 UCMAQ8WVF2 138 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 RNF34Q969K3 372 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 IGSF8Q969P0 613 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 NTAN1Q96AB6 310 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 MYO19Q96H55 970 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 ZC3H10Q96K80 434 aaKnown RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 OSBPL2Q9H1P3 480 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 TMEM245Q9H330 911 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 ABCB8Q9NUT2 735 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 ARHGAP20Q9P2F6 1191 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ZNF292O60281 2723 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 TYW5A2RUC4 315 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 CLDN11O75508 207 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 DLDP09622 509 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 RRM1P23921 792 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 SDC4P31431 198 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 CD70P32970 193 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ADRA1BP35368 520 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 CDH4P55283 916 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 OXCT1P55809 520 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 HDAC4P56524 1084 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 RPL7AP62424 266 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 SCAPQ12770 1279 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 LMAN2Q12907 356 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ZNF234Q14588 700 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 PTPRNQ16849 979 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 SH3PXD2AQ5TCZ1 1133 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 MANEALQ5VSG8 457 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 CXorf57Q6NSI4 855 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 CCAR2Q8N163 923 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 TSTD1Q8NFU3 115 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 FNIP1Q8TF40 1166 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 SELENOOQ9BVL4 669 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 PARVAQ9NVD7 372 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 KIAA1522Q9P206 1035 aaPredicted RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
SNORD55-201ENST00000581525 SYNJ2BP-COX16A0A087WUM0 186 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 TMEM191CA6NGB0 347 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 WASH3PC4AMC7 463 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 GJB6O95452 261 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 ASLP04424 464 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 ATP5BP06576 529 aaKnown RBP13.03□□□□□ -0.32
SNORD55-201ENST00000581525 MYBL1P10243 752 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 GPD1P21695 349 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 IL12RB1P42701 662 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
SNORD55-201ENST00000581525 C15orf59Q2T9L4 293 aaPredicted RBP13.03□□□□□ -0.32
SNORD55-201ENST00000581525 RAB6CQ53S08 254 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 DNAJC24Q6P3W2 148 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 CHPFQ8IZ52 775 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 CPLX3Q8WVH0 158 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 MRGPRX3Q96LB0 322 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 CNPY3Q9BT09 278 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 RAB6CQ9H0N0 254 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
SNORD55-201ENST00000581525 COX16Q9P0S2 106 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 STIM2Q9P246 746 aa13.03□□□□□ -0.32
SNORD55-201ENST00000581525 A0A087X0T9 212 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 CXorf51AA0A1B0GTR3 108 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 SSU72P8A0A1W2PR75 194 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 SRPRAP08240 638 aaKnown RBP13.02□□□□□ -0.33
SNORD55-201ENST00000581525 PLEKP08567 350 aaPredicted RBP13.02□□□□□ -0.33
SNORD55-201ENST00000581525 FAM228BP0C875 321 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 HOXB2P14652 356 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 GABRG2P18507 467 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 POLR2EP19388 210 aaKnown RBP13.02□□□□□ -0.33
SNORD55-201ENST00000581525 P2RY2P41231 377 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 PXNP49023 591 aaPredicted RBP13.02□□□□□ -0.33
SNORD55-201ENST00000581525 AIF1P55008 147 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 ATP11AP98196 1134 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 OGDHQ02218 1023 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 CAMK2GQ13555 558 aaPredicted RBP13.02□□□□□ -0.33
SNORD55-201ENST00000581525 ACAP1Q15027 740 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 PLEKHG6Q3KR16 790 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 FUT11Q495W5 492 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
SNORD55-201ENST00000581525 KIAA1211LQ6NV74 962 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms