RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SQLEQ14534 574 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 NR1D2Q14995 579 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 VN1R5Q7Z5H4 357 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 UXS1Q8NBZ7 420 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 ATG4CQ96DT6 458 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 PHACTR1Q9C0D0 580 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 SYNDIG1Q9H7V2 258 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 ATXN2Q99700 1313 aaKnown RBP14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 PTGES3LE9PB15 166 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 RGS14O43566 566 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 SNX3O60493 162 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 LTFP02788 710 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 RHOCP08134 193 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 CDC25CP30307 473 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 EPS8Q12929 822 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 SEC23AQ15436 765 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 GSTA3Q16772 222 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 C3orf67Q6ZVT6 689 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 TSPAN14Q8NG11 270 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 PLEKHG4BQ96PX9 1271 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 DGCR6LQ9BY27 220 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 LRMDAQ9H2I8 198 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 MBD2Q9UBB5 411 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 SHBGP04278 402 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 CAPN1P07384 714 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 ABCB1P08183 1280 aaPredicted RBP14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 CLTBP09497 229 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 CCNA2P20248 432 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 GRK3P35626 688 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 ST3GAL1Q11201 340 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 DPYSL3Q14195 570 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 DUSP9Q99956 384 aaKnown RBP14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 NUDT12Q9BQG2 462 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 KLHL1Q9NR64 748 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 CCDC167Q9P0B6 97 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 RNF181Q9P0P0 153 aa14.83□□□□□ -0.04
CSNK1D-217ENST00000581241 TAF4O00268 1085 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 DDX3XO00571 662 aaKnown RBP eCLIP14.82□□□□□ -0.043e-16■■■□□ 17.2
CSNK1D-217ENST00000581241 LIN7AO14910 233 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TPH1P17752 444 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 GRK4P32298 578 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 NRF1Q16656 503 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ZNF284Q2VY69 593 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TMEM63BQ5T3F8 832 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 BROXQ5VW32 411 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TMC7Q7Z402 723 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 CAMK1DQ8IU85 385 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 MREGQ8N565 214 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 CAPSLQ8WWF8 208 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 CRNNQ9UBG3 495 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 SEC22BO75396 215 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 LRG1P02750 347 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 RFX3P48380 749 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 RENBPP51606 427 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TGM3Q08188 693 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ZSWIM7Q19AV6 140 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 MARK2Q7KZI7 788 aaKnown RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 KLHL28Q9NXS3 571 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 VAV3Q9UKW4 847 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 CHADO15335 359 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 MBL2P11226 248 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 PKNOX1P55347 436 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 RRP1BQ14684 758 aaKnown RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 CDC73Q6P1J9 531 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ADHFE1Q8IWW8 467 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 RNF148Q8N7C7 305 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ETNPPLQ8TBG4 499 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 STARD8Q92502 1023 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 LENG1Q96BZ8 264 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 PXMP2Q9NR77 195 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 EHD3Q9NZN3 535 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TRPC4Q9UBN4 977 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 SF3B1O75533 1304 aaKnown RBP eCLIP14.82□□□□□ -0.043e-6■■■■■ 47.9
CSNK1D-217ENST00000581241 KLHL18O94889 574 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 DSG3P32926 999 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 GSTM5P46439 218 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TKTL1P51854 596 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 KPNA1P52294 538 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 RHOAP61586 193 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 SH3BP5LQ7L8J4 393 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ZNF398Q8TD17 642 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 BARX2Q9UMQ3 279 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 GPR182O15218 404 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ATP12AP54707 1039 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 SLC20A2Q08357 652 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 PDIA6Q15084 440 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TAF5Q15542 800 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 NTRK3Q16288 839 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 ZNF438Q7Z4V0 828 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 DHDDSQ86SQ9 333 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 SLITRK2Q9H156 845 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 TMEM51Q9NW97 253 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 RRN3Q9NYV6 651 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 AHSPQ9NZD4 102 aa14.82□□□□□ -0.04
CSNK1D-217ENST00000581241 NFICP08651 508 aa14.81□□□□□ -0.04
CSNK1D-217ENST00000581241 CNPP09543 421 aaKnown RBP14.81□□□□□ -0.04
CSNK1D-217ENST00000581241 HPCAL1P37235 193 aa14.81□□□□□ -0.04
CSNK1D-217ENST00000581241 PHKG1Q16816 387 aa14.81□□□□□ -0.04
CSNK1D-217ENST00000581241 FBXL16Q8N461 479 aa14.81□□□□□ -0.04
CSNK1D-217ENST00000581241 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms