RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 XPO7Q9UIA9 1087 aaKnown RBP10.74□□□□□ -0.69
CCDC47-203ENST00000580986 SORCS3Q9UPU3 1222 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 NEU3Q9UQ49 428 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 EFR3BQ9Y2G0 817 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 WNT6Q9Y6F9 365 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 KIAA1549LQ6ZVL6 1849 aa10.74□□□□□ -0.69
CCDC47-203ENST00000580986 USP27XA6NNY8 438 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 TMEM110-MUSTN1A8MSY1 372 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 E9PAM4 449 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 CACNG3O60359 315 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 CLDN11O75508 207 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 LRIG2O94898 1065 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 CYP17A1P05093 508 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 SP100P23497 879 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 GDI1P31150 447 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 SLC6A4P31645 630 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PTPN7P35236 360 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 ARL4AP40617 200 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PEX5P50542 639 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 CDH4P55283 916 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 OXCT1P55809 520 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 AMPD2Q01433 879 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 GAD2Q05329 585 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 DHCR24Q15392 516 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PPP2R5EQ16537 467 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 ITPRIPL2Q3MIP1 535 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 DAB2IPQ5VWQ8 1189 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 RAP1GAP2Q684P5 730 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 TXNRD3NBQ6F5E7 133 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 FBXL22Q6P050 247 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 RHBDF2Q6PJF5 856 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 SUGP1Q8IWZ8 645 aaKnown RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 UBALD2Q8IYN6 164 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 UBL4BQ8N7F7 174 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 TBC1D31Q96DN5 1066 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 RBM41Q96IZ5 413 aaKnown RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PRICKLE1Q96MT3 831 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 ZYG11BQ9C0D3 744 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 CARD9Q9H257 536 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 LINC00597Q9H2U6 94 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 GOLPH3Q9H4A6 298 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 DHX35Q9H5Z1 703 aaKnown RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 C8orf33Q9H7E9 229 aaPredicted RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 BRD9Q9H8M2 597 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 ECT2Q9H8V3 914 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 PCDH18Q9HCL0 1135 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 TRMT1Q9NXH9 659 aaKnown RBP10.73□□□□□ -0.69
CCDC47-203ENST00000580986 FBXO10Q9UK96 956 aa10.73□□□□□ -0.69
CCDC47-203ENST00000580986 TICRRQ7Z2Z1 1910 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 CXorf51AA0A1B0GTR3 108 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 C3orf70A6NLC5 250 aaPredicted RBP10.72□□□□□ -0.69
CCDC47-203ENST00000580986 H3BRJ5 948 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 ZRANB2O95218 330 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC47-203ENST00000580986 ADH5P11766 374 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 RHOQP17081 205 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 HOXD9P28356 352 aaPredicted RBP10.72□□□□□ -0.69
CCDC47-203ENST00000580986 MAPKAPK2P49137 400 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 RWDD2BP57060 319 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 SLC12A1Q13621 1099 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 DPYSQ14117 519 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 GRM2Q14416 872 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 SMTNL2Q2TAL5 461 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 LY6G5CQ5SRR4 150 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 ZNF783Q6ZMS7 281 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 SETD3Q86TU7 594 aaPredicted RBP10.72□□□□□ -0.69
CCDC47-203ENST00000580986 ZSCAN30Q86W11 494 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 NLRP14Q86W24 1093 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 TMEM25Q86YD3 366 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 CPNE8Q86YQ8 564 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 ETFBKMTQ8IXQ9 262 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 RCOR2Q8IZ40 523 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 LGI2Q8N0V4 545 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 LZTR1Q8N653 840 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 CSGALNACT1Q8TDX6 532 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 RSAD2Q8WXG1 361 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 EXOC4Q96A65 974 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 RPRD1AQ96P16 312 aaPredicted RBP10.72□□□□□ -0.69
CCDC47-203ENST00000580986 SIK2Q9H0K1 926 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 CATSPERBQ9H7T0 1116 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 TMPRSS4Q9NRS4 437 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 TMEM248Q9NWD8 314 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 ZNF212Q9UDV6 495 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 VANGL2Q9ULK5 521 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 TBC1D30Q9Y2I9 924 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 SLC27A6Q9Y2P4 619 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 CHD5Q8TDI0 1954 aa10.72□□□□□ -0.69
CCDC47-203ENST00000580986 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 FAM72CH0Y354 149 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 KIF2AO00139 706 aaPredicted RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 EEF2KO00418 725 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CES2O00748 559 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 DDX3YO15523 660 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 FTCDO95954 541 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 ASGR2P07307 311 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms