RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KANSL1LA0AUZ9 987 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 TBL1XO60907 577 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 TULP3O75386 442 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 COMTP21964 271 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 HOXD9P28356 352 aaPredicted RBP16.01■□□□□ 0.15
SS18-216ENST00000580751 MIPP30301 263 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 OPRD1P41143 372 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 NRG1Q02297 640 aaPredicted RBP16.01■□□□□ 0.15
SS18-216ENST00000580751 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
SS18-216ENST00000580751 FBXL22Q6P050 247 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 POLNQ7Z5Q5 900 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
SS18-216ENST00000580751 ARFGAP1Q8N6T3 406 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 UBL4BQ8N7F7 174 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 CD101Q93033 1021 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 BTBD6Q96KE9 485 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 RPRD1AQ96P16 312 aaPredicted RBP16.01■□□□□ 0.15
SS18-216ENST00000580751 TLR10Q9BXR5 811 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 SLC2A11Q9BYW1 496 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 OSBPL2Q9H1P3 480 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 EPHX3Q9H6B9 360 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 LTB4R2Q9NPC1 389 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 DNAJC17Q9NVM6 304 aaKnown RBP16.01■□□□□ 0.15
SS18-216ENST00000580751 PLK2Q9NYY3 685 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 DEC1Q9P2X7 70 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 VANGL2Q9ULK5 521 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 SNX12Q9UMY4 172 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 PCDHA3Q9Y5H8 950 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 SAR1BQ9Y6B6 198 aa16.01■□□□□ 0.15
SS18-216ENST00000580751 SHISA7A6NL88 538 aa16■□□□□ 0.15
SS18-216ENST00000580751 STK25O00506 426 aa16■□□□□ 0.15
SS18-216ENST00000580751 PSTPIP1O43586 416 aa16■□□□□ 0.15
SS18-216ENST00000580751 SPOPO43791 374 aa16■□□□□ 0.15
SS18-216ENST00000580751 CTNNA1P35221 906 aaKnown RBP16■□□□□ 0.15
SS18-216ENST00000580751 GGCXP38435 758 aa16■□□□□ 0.15
SS18-216ENST00000580751 SGSHP51688 502 aa16■□□□□ 0.15
SS18-216ENST00000580751 RPS24P62847 133 aaKnown RBP16■□□□□ 0.15
SS18-216ENST00000580751 UBXN2BQ14CS0 331 aa16■□□□□ 0.15
SS18-216ENST00000580751 PON2Q15165 354 aa16■□□□□ 0.15
SS18-216ENST00000580751 HADHQ16836 314 aaKnown RBP16■□□□□ 0.15
SS18-216ENST00000580751 RNF43Q68DV7 783 aa16■□□□□ 0.15
SS18-216ENST00000580751 GRAMD4Q6IC98 578 aa16■□□□□ 0.15
SS18-216ENST00000580751 NUDT18Q6ZVK8 323 aa16■□□□□ 0.15
SS18-216ENST00000580751 C12orf40Q86WS4 652 aa16■□□□□ 0.15
SS18-216ENST00000580751 PSTKQ8IV42 348 aaKnown RBP16■□□□□ 0.15
SS18-216ENST00000580751 RHOT1Q8IXI2 618 aa16■□□□□ 0.15
SS18-216ENST00000580751 NAT16Q8N8M0 369 aa16■□□□□ 0.15
SS18-216ENST00000580751 PBKQ96KB5 322 aa16■□□□□ 0.15
SS18-216ENST00000580751 PNKPQ96T60 521 aa16■□□□□ 0.15
SS18-216ENST00000580751 OSBPL6Q9BZF3 934 aa16■□□□□ 0.15
SS18-216ENST00000580751 CARD9Q9H257 536 aa16■□□□□ 0.15
SS18-216ENST00000580751 TMPRSS4Q9NRS4 437 aa16■□□□□ 0.15
SS18-216ENST00000580751 OR12D3Q9UGF7 316 aa16■□□□□ 0.15
SS18-216ENST00000580751 PCSK1NQ9UHG2 260 aa16■□□□□ 0.15
SS18-216ENST00000580751 FZD10Q9ULW2 581 aa16■□□□□ 0.15
SS18-216ENST00000580751 USP18Q9UMW8 372 aa16■□□□□ 0.15
SS18-216ENST00000580751 HYOU1Q9Y4L1 999 aa16■□□□□ 0.15
SS18-216ENST00000580751 KIAA1549LQ6ZVL6 1849 aa16■□□□□ 0.15
SS18-216ENST00000580751 A0A1B0GVM2 712 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 TCAF2A6NFQ2 919 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 E9PAM4 449 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 NCAM2O15394 837 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 FTCDO95954 541 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 DRD1P21728 446 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 CD72P21854 359 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 DGKGP49619 791 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 GALK1P51570 392 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 CDH18Q13634 790 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 LRRC32Q14392 662 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 C5orf22Q49AR2 442 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 BOLA3Q53S33 107 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 TMEM196Q5HYL7 178 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 ERMARDQ5T6L9 678 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 BMP8AQ7Z5Y6 402 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 MFN1Q8IWA4 741 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 FLCNQ8NFG4 579 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 ZNF592Q92610 1267 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 MYEOVQ96EZ4 313 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 P2RY11Q96G91 374 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 PEBP4Q96S96 227 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 EPAS1Q99814 870 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 RRAGDQ9NQL2 400 aaPredicted RBP15.99■□□□□ 0.15
SS18-216ENST00000580751 ARHGEF4Q9NR80 690 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 STIM2Q9P246 746 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 FBXO10Q9UK96 956 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 NDRG2Q9UN36 371 aaKnown RBP15.99■□□□□ 0.15
SS18-216ENST00000580751 AP4E1Q9UPM8 1137 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 SLC27A6Q9Y2P4 619 aa15.99■□□□□ 0.15
SS18-216ENST00000580751 IGLV3-10A0A075B6K4 115 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 TMEM110-MUSTN1A8MSY1 372 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 FANCGO15287 622 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 CLDN11O75508 207 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 LUC7L3O95232 432 aaKnown RBP15.98■□□□□ 0.15
SS18-216ENST00000580751 KAT7O95251 611 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
SS18-216ENST00000580751 APODP05090 189 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 KRT7P08729 469 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 TARSP26639 723 aaKnown RBP15.98■□□□□ 0.15
SS18-216ENST00000580751 L1CAMP32004 1257 aa15.98■□□□□ 0.15
SS18-216ENST00000580751 HTR7P34969 479 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms