RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 A0A1B0GVM2 712 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 TCAF2A6NFQ2 919 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 MOCS3O95396 460 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 EPHX1P07099 455 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 UNGP13051 313 aaPredicted RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 MMP8P22894 467 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 PRKCHP24723 683 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 SULT1E1P49888 294 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 NME3Q13232 169 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 CAMK2GQ13555 558 aaPredicted RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 SLC12A1Q13621 1099 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 PTPRNQ16849 979 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 RSPO4Q2I0M5 234 aaPredicted RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 FNDC3BQ53EP0 1204 aaKnown RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 OTUD1Q5VV17 481 aaPredicted RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 SND1Q7KZF4 910 aaKnown RBP eCLIP15.34■□□□□ 0.05
SS18-212ENST00000579061 CFAP52Q8N1V2 620 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 KDM1BQ8NB78 822 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 NETO1Q8TDF5 533 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 CYB5D2Q8WUJ1 264 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 MKRN2Q9H000 416 aaKnown RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 WDCPQ9H6R7 721 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 PRDM16Q9HAZ2 1276 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 ARHGEF38Q9NXL2 777 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 COX16Q9P0S2 106 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 SUN2Q9UH99 717 aa15.34■□□□□ 0.05
SS18-212ENST00000579061 INTS6Q9UL03 887 aaKnown RBP15.34■□□□□ 0.05
SS18-212ENST00000579061 DOCK4Q8N1I0 1966 aa15.33■□□□□ 0.05
SS18-212ENST00000579061 IGHV1OR15-9A0A0B4J2B8 117 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 A0A1W2PQC6 194 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 H0Y626 953 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 TEX33O43247 280 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 AP5Z1O43299 807 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 CAVIN2O95810 425 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 FERP16591 822 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 FLT3P36888 993 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 DHPSP49366 369 aaPredicted RBP15.33■□□□□ 0.04
SS18-212ENST00000579061 COPAP53621 1224 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 OXCT1P55809 520 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 GSCP56915 257 aaPredicted RBP15.33■□□□□ 0.04
SS18-212ENST00000579061 CREB5Q02930 508 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 CENPCQ03188 943 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 DEUP1Q05D60 604 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 C5orf22Q49AR2 442 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 FBXL22Q6P050 247 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 ERMP1Q7Z2K6 904 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 CYP2U1Q7Z449 544 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 BNIPLQ7Z465 357 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
SS18-212ENST00000579061 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 C12orf50Q8NA57 414 aaPredicted RBP15.33■□□□□ 0.04
SS18-212ENST00000579061 PPP1R9BQ96SB3 815 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 TBCBQ99426 244 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 PIGVQ9NUD9 493 aa15.33■□□□□ 0.04
SS18-212ENST00000579061 USP36Q9P275 1121 aaKnown RBP15.33■□□□□ 0.04
SS18-212ENST00000579061 A0A1B0GTH6 734 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 SYCE3A1L190 88 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 GOLGA8SH3BPF8 625 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 PAGE1O75459 146 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 SRPRAP08240 638 aaKnown RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 TFE3P19532 575 aaPredicted RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 CSKP41240 450 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 NSFP46459 744 aaKnown RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 PLK1P53350 603 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 LIMK1P53667 647 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 ST8SIA6P61647 398 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 AUHQ13825 339 aaKnown RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 ARID5BQ14865 1188 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 CLEC16AQ2KHT3 1053 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 PLEKHG6Q3KR16 790 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 C2CD6Q53TS8 623 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 FSCBQ5H9T9 825 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 PITRM1Q5JRX3 1037 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 KIAA1324Q6UXG2 1013 aaKnown RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 MMS22LQ6ZRQ5 1243 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 PHF13Q86YI8 300 aaPredicted RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 OR2T3Q8NH03 318 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 PRCCQ92733 491 aaPredicted RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 SIPA1Q96FS4 1042 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 RPRD1AQ96P16 312 aaPredicted RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 PCDHB18PQ96TA0 734 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 RTKNQ9BST9 563 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 TKTL2Q9H0I9 626 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 ITM2CQ9NQX7 267 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 CDV3Q9UKY7 258 aaKnown RBP15.32■□□□□ 0.04
SS18-212ENST00000579061 CYP8B1Q9UNU6 501 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 HS3ST4Q9Y661 456 aa15.32■□□□□ 0.04
SS18-212ENST00000579061 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 ENDOD1O94919 500 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 ADCY5O95622 1261 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 IGLV3-19P01714 112 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 CALB1P05937 261 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 HLA-EP13747 358 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 OXTRP30559 389 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 HOXD12P35452 270 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 TPM4P67936 248 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 RPL6Q02878 288 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms