RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ZNF461Q8TAF7 563 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 LGMNQ99538 433 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 TLR8Q9NR97 1041 aaKnown RBP20.85■□□□□ 0.93
SMG8-203ENST00000578922 AFF4Q9UHB7 1163 aaKnown RBP20.85■□□□□ 0.93
SMG8-203ENST00000578922 SLC12A4Q9UP95 1085 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 PCDHB12Q9Y5F1 795 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 PLXNA3P51805 1871 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 FAM92AA1XBS5 289 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 PAGE1O75459 146 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 EPHB2P29323 1055 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 STIP1P31948 543 aaKnown RBP20.84■□□□□ 0.93
SMG8-203ENST00000578922 C10orf120Q5SQS8 335 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 TMEM240Q5SV17 173 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 RWDD4Q6NW29 188 aaKnown RBP20.84■□□□□ 0.93
SMG8-203ENST00000578922 SERPINB11Q96P15 392 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 EPAS1Q99814 870 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 ELAC2Q9BQ52 826 aaKnown RBP20.84■□□□□ 0.93
SMG8-203ENST00000578922 PLCD4Q9BRC7 762 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 HAUS2Q9NVX0 235 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 ARHGEF38Q9NXL2 777 aa20.84■□□□□ 0.93
SMG8-203ENST00000578922 DCLK1O15075 740 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 FGF18O76093 207 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 ACSL3O95573 720 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 HMBSP08397 361 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 NR2C2P49116 596 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 TUFMP49411 452 aaKnown RBP20.83■□□□□ 0.93
SMG8-203ENST00000578922 BASP1P80723 227 aaKnown RBP20.83■□□□□ 0.93
SMG8-203ENST00000578922 GAD2Q05329 585 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 LONRF1Q17RB8 773 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 RNASEH2BQ5TBB1 312 aaKnown RBP20.83■□□□□ 0.93
SMG8-203ENST00000578922 ANKRD22Q5VYY1 191 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 TRPM8Q7Z2W7 1104 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 CCSER2Q9H7U1 834 aa20.83■□□□□ 0.93
SMG8-203ENST00000578922 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMG8-203ENST00000578922 SNX3O60493 162 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 SPATA31D3P0C874 917 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 SLC45A4Q5BKX6 768 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 SPATA31D4Q6ZUB0 917 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 CDKL3Q8IVW4 592 aaPredicted RBP20.83■□□□□ 0.92
SMG8-203ENST00000578922 CCDC110Q8TBZ0 833 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 DYDC1Q8WWB3 177 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 MRPL17Q9NRX2 175 aaKnown RBP20.83■□□□□ 0.92
SMG8-203ENST00000578922 LGALS13Q9UHV8 139 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 ZMYND8Q9ULU4 1186 aaPredicted RBP20.83■□□□□ 0.92
SMG8-203ENST00000578922 KIAA1671Q9BY89 1806 aa20.83■□□□□ 0.92
SMG8-203ENST00000578922 GREB1Q4ZG55 1949 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 BCLAF3A2AJT9 711 aaKnown RBP20.82■□□□□ 0.92
SMG8-203ENST00000578922 CFAP73A6NFT4 308 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 ABLIM3O94929 683 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 MTM1Q13496 603 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 BRMS1LQ5PSV4 323 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 FAXCQ5TGI0 409 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 CCNYQ8ND76 341 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 CPT1BQ92523 772 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 CCDC77Q9BR77 488 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 TCRBV7S3A2A0A539 114 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 TMEM120BA0PK00 339 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 MGRN1O60291 552 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 OAS1P00973 400 aaKnown RBP20.82■□□□□ 0.92
SMG8-203ENST00000578922 PPM1AP35813 382 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 TBX4P57082 545 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 AP1B1Q10567 949 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 HP1BP3Q5SSJ5 553 aaPredicted RBP20.82■□□□□ 0.92
SMG8-203ENST00000578922 NPWQ8N729 165 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 TFB1MQ8WVM0 346 aaKnown RBP20.82■□□□□ 0.92
SMG8-203ENST00000578922 FCRL2Q96LA5 508 aaPredicted RBP20.82■□□□□ 0.92
SMG8-203ENST00000578922 ZNF512Q96ME7 567 aaPredicted RBP20.82■□□□□ 0.92
SMG8-203ENST00000578922 OLFM3Q96PB7 478 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 QKIQ96PU8 341 aaKnown RBP eCLIP20.82■□□□□ 0.92
SMG8-203ENST00000578922 ACTL7BQ9Y614 415 aa20.82■□□□□ 0.92
SMG8-203ENST00000578922 LCHNA4D1U4 455 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 PRRG1O14668 218 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 VAV1P15498 845 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 IFNAR2P48551 515 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 HTRA4P83105 476 aaPredicted RBP20.81■□□□□ 0.92
SMG8-203ENST00000578922 MSANTD2Q6P1R3 559 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 GBP7Q8N8V2 638 aaPredicted RBP20.81■□□□□ 0.92
SMG8-203ENST00000578922 KLHL23Q8NBE8 558 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 CLIC5Q9NZA1 410 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 MARCH2Q9P0N8 246 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 TLR6Q9Y2C9 796 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 USP15Q9Y4E8 981 aaPredicted RBP20.81■□□□□ 0.92
SMG8-203ENST00000578922 YIPF1Q9Y548 306 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 INSL6Q9Y581 213 aa20.81■□□□□ 0.92
SMG8-203ENST00000578922 CFAP69A5D8W1 941 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 F5H423 210 aaPredicted RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 TEX28O15482 410 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 LINC00271P0C7V0 271 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 PPP2R5DQ14738 602 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 STAT4Q14765 748 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 MORF4L2Q15014 288 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 PAFAH1B3Q15102 231 aaKnown RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 CCDC38Q502W7 563 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 HEATR6Q6AI08 1181 aaKnown RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 ZCCHC9Q8N567 271 aaKnown RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 PRCCQ92733 491 aaPredicted RBP20.8■□□□□ 0.92
SMG8-203ENST00000578922 RBM15Q96T37 977 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMG8-203ENST00000578922 CEP41Q9BYV8 373 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 OSBPL2Q9H1P3 480 aa20.8■□□□□ 0.92
SMG8-203ENST00000578922 PRDM12Q9H4Q4 367 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms