RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 C8orf74Q6P047 294 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 DRICH1Q6PGQ1 229 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 PARM1Q6UWI2 310 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 CCDC105Q8IYK2 499 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 ZDHHC14Q8IZN3 488 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 C12orf50Q8NA57 414 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 SH3RF2Q8TEC5 729 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 TSC1Q92574 1164 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 TBC1D31Q96DN5 1066 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 CSPG4P5Q96PW8 444 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 KXD1Q9BQD3 176 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 KLF16Q9BXK1 252 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 SIK2Q9H0K1 926 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 RAB6CQ9H0N0 254 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 LRRC19Q9H756 370 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 TRPV4Q9HBA0 871 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 RBM12Q9NTZ6 932 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 CWC15Q9P013 229 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 NUMBLQ9Y6R0 609 aa14.37□□□□□ -0.11
CSNK1D-209ENST00000578904 C5orf42Q9H799 3197 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 NUP205Q92621 2012 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 TYW5A2RUC4 315 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 HEPACAM2A8MVW5 462 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 LEFTY2O00292 366 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 MCF2LO15068 1137 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 GAS8O95995 478 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 CD48P09326 243 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 GOT1P17174 413 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 EPHB2P29323 1055 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 MLLT6P55198 1093 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 HTR4Q13639 388 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 CA9Q16790 459 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 SLC9A4Q6AI14 798 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 TANGO2Q6ICL3 276 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 CCDC137Q6PK04 289 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 TMCO3Q6UWJ1 677 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 RFX8Q6ZV50 586 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 SYDE1Q6ZW31 735 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 KLHL7Q8IXQ5 586 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 LZTR1Q8N653 840 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 ATL2Q8NHH9 583 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 RUBCNQ92622 972 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 FGF14Q92915 247 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 E2F7Q96AV8 911 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 ZFRQ96KR1 1074 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 KRT12Q99456 494 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 OBP2AQ9NY56 170 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 SMARCAL1Q9NZC9 954 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 CFAP97Q9P2B7 532 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 SH3BP1Q9Y3L3 701 aa14.36□□□□□ -0.11
CSNK1D-209ENST00000578904 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 ANHXE9PGG2 379 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 F5H5T6 163 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 NDC80O14777 642 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 NCAM2O15394 837 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 ACSL4O60488 711 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 ECI2O75521 394 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 BMP1P13497 986 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 TCF3P15923 654 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 DYNLT1P63172 113 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 ZXDBP98169 803 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 SEMA3BQ13214 749 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 LLGL1Q15334 1064 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 ZNF77Q15935 545 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 RABGAP1LQ5R372 815 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 RWDD4Q6NW29 188 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 GPR161Q8N6U8 529 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 CCHCR1Q8TD31 782 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 BPIFB1Q8TDL5 484 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 ELSPBP1Q96BH3 223 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 RSPRY1Q96DX4 576 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 RAB17Q9H0T7 212 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 GKN1Q9NS71 199 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 PPARGC1AQ9UBK2 798 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 LIMD1Q9UGP4 676 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 PCYOX1Q9UHG3 505 aa14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 DRG1Q9Y295 367 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 UTP11Q9Y3A2 253 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-209ENST00000578904 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 CFAP69A5D8W1 941 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 PPP1R12AO14974 1030 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 STC2O76061 302 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 LRIG2O94898 1065 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 ECEL1O95672 775 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 MX2P20592 715 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 AMPD1P23109 780 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 IL4RP24394 825 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 CORO1AP31146 461 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 ACTN2P35609 894 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 COILP38432 576 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 DR1Q01658 176 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 XRCC4Q13426 336 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 GRM2Q14416 872 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 TTC39BQ5VTQ0 682 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 VITQ6UXI7 678 aa14.34□□□□□ -0.11
CSNK1D-209ENST00000578904 GSTA5Q7RTV2 222 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms