RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 CSGALNACT1Q8TDX6 532 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 IRF7Q92985 503 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 TMA16Q96EY4 203 aaKnown RBP12.52□□□□□ -0.41
IFT20-207ENST00000578547 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 WDR24Q96S15 920 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 MPP6Q9NZW5 540 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 JRKLQ9Y4A0 524 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ARNTLO00327 626 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 KCNK3O14649 394 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 CNTN5O94779 1100 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 ATP1A1P05023 1023 aaKnown RBP12.51□□□□□ -0.41
IFT20-207ENST00000578547 KDELR1P24390 212 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 ARSEP51690 589 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 NRG1Q02297 640 aaPredicted RBP12.51□□□□□ -0.41
IFT20-207ENST00000578547 RUNX3Q13761 415 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 PDK2Q15119 407 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 ALFQ53S48 1182 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 MANEALQ5VSG8 457 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 TTC39BQ5VTQ0 682 aaPredicted RBP12.51□□□□□ -0.41
IFT20-207ENST00000578547 RHBDF2Q6PJF5 856 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 RFX8Q6ZV50 586 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 ZNF683Q8IZ20 524 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 P2RY11Q96G91 374 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
IFT20-207ENST00000578547 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 ZYG11BQ9C0D3 744 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 ECT2Q9H8V3 914 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
IFT20-207ENST00000578547 MUTYHQ9UIF7 546 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 NEU3Q9UQ49 428 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
IFT20-207ENST00000578547 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 A0A1B0GVM2 712 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 TCAF2A6NFQ2 919 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
IFT20-207ENST00000578547 C3orf70A6NLC5 250 aaPredicted RBP12.5□□□□□ -0.41
IFT20-207ENST00000578547 GFRA2O00451 464 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 ZRANB2O95218 330 aaKnown RBP eCLIP12.5□□□□□ -0.41
IFT20-207ENST00000578547 SRFP11831 508 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 TYRP14679 529 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 AMPD1P23109 780 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 HOXD9P28356 352 aaPredicted RBP12.5□□□□□ -0.41
IFT20-207ENST00000578547 CXCR5P32302 372 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 SOX9P48436 509 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 PEX5P50542 639 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 GAD2Q05329 585 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 NR1H3Q13133 447 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 CDH18Q13634 790 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 DPYSQ14117 519 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 ITPRIPL2Q3MIP1 535 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 IER5LQ5T953 404 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 DCAF12L1Q5VU92 463 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 KAZNQ674X7 775 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 MFSD7Q6UXD7 560 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 SPOCD1Q6ZMY3 1216 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 NYAP1Q6ZVC0 841 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 RFX6Q8HWS3 928 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 MFN1Q8IWA4 741 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
IFT20-207ENST00000578547 RCOR2Q8IZ40 523 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 NAT16Q8N8M0 369 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 NAPGQ99747 312 aaPredicted RBP12.5□□□□□ -0.41
IFT20-207ENST00000578547 ZNF670Q9BS34 389 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 ARHGEF4Q9NR80 690 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 SLC2A4RGQ9NR83 387 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 PPARGC1AQ9UBK2 798 aaKnown RBP12.5□□□□□ -0.41
IFT20-207ENST00000578547 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 TICRRQ7Z2Z1 1910 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 NCOR1O75376 2440 aa12.5□□□□□ -0.41
IFT20-207ENST00000578547 BDP1A6H8Y1 2624 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
IFT20-207ENST00000578547 CTAGE9A4FU28 777 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 DRGXA6NNA5 263 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 H0Y626 953 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
IFT20-207ENST00000578547 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
IFT20-207ENST00000578547 PENKP01210 267 aaPredicted RBP12.49□□□□□ -0.41
IFT20-207ENST00000578547 PYGMP11217 842 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 KRT10P13645 584 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 RHOQP17081 205 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 ERCC2P18074 760 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 HOXC13P31276 330 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 HTR7P34969 479 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 CDKN2BP42772 138 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 NUMBP49757 651 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 ZNF135P52742 658 aaPredicted RBP12.49□□□□□ -0.41
IFT20-207ENST00000578547 ETF1P62495 437 aaKnown RBP12.49□□□□□ -0.41
IFT20-207ENST00000578547 DYNLT1P63172 113 aa12.49□□□□□ -0.41
IFT20-207ENST00000578547 KDSRQ06136 332 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms