RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 PSMA4P25789 261 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 CD151P48509 253 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ULK2Q8IYT8 1036 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 BHLHE22Q8NFJ8 381 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 KCTD4Q8WVF5 259 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 EBNA1BP2Q99848 306 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 A0A0A0MRY4 1105 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SH3BGRLO75368 114 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 NFKB1P19838 968 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ATP6V1B2P21281 511 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ADORA2AP29274 412 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 TUBP50607 506 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 RABGGTBP53611 331 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 PRKAA1Q13131 559 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 FASTKQ14296 549 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 NEDD8Q15843 81 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 AMIGO2Q86SJ2 522 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 MICU2Q8IYU8 434 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 OTULINQ96BN8 352 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SPATA13Q96N96 652 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 MTFR1LQ9H019 292 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 LRMDAQ9H2I8 198 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 EXOSC4Q9NPD3 245 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SLC12A8A0AV02 714 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 PYGLP06737 847 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ANPEPP15144 967 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 CNTFP26441 200 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 HUNKP57058 714 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 MRNIPQ6NTE8 343 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SLC27A1Q6PCB7 646 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 SLC41A1Q8IVJ1 513 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 C18orf25Q96B23 403 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 CERS2Q96G23 380 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 OR12D3Q9UGF7 316 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 MCM8Q9UJA3 840 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 LTN1O94822 1766 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 A8MX80 341 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 M0R3G1 203 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 MRASO14807 208 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 RASSF9O75901 435 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 GUCA1CO95843 209 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 F9P00740 461 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 CDH13P55290 713 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 PWP1Q13610 501 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 KRT33BQ14525 404 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 TRMT10BQ6PF06 316 aaKnown RBP12.29□□□□□ -0.44
ERBB2-206ENST00000578373 CDCA5Q96FF9 252 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 TRIM54Q9BYV2 358 aa12.29□□□□□ -0.44
ERBB2-206ENST00000578373 CHADO15335 359 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 SNUPNO95149 360 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 LTFP02788 710 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ERCC2P18074 760 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ARF4P18085 180 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MAXP61244 160 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 LACTB2Q53H82 288 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MBOAT7Q96N66 472 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 PCDH18Q9HCL0 1135 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MID1IP1Q9NPA3 183 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 PCDHGB4Q9UN71 923 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 WASF2Q9Y6W5 498 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MYH6P13533 1939 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 H0Y626 953 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 UGT1A9O60656 530 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MAFO75444 373 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 TRIM16O95361 564 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 GSTT1P30711 240 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF157P51786 506 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ABHD15Q6UXT9 468 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 CATSPERGQ6ZRH7 1159 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 HPS6Q86YV9 775 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MFN1Q8IWA4 741 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF555Q8NEP9 628 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 FBXO32Q969P5 355 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 UBE2OQ9C0C9 1292 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 UGT1A7Q9HAW7 530 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 UGT1A10Q9HAW8 530 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 UGT1A8Q9HAW9 530 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 DDX28Q9NUL7 540 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 TBC1D23Q9NUY8 699 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 SYBUQ9NX95 663 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 SLC17A6Q9P2U8 582 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF212Q9UDV6 495 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 TRMT6Q9UJA5 497 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 HEATR9A2RTY3 570 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 C17orf102A2RUQ5 167 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms