RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 DHX35Q9H5Z1 703 aaKnown RBP14.22□□□□□ -0.13
RNF43-202ENST00000577625 C10orf88Q9H8K7 445 aa14.22□□□□□ -0.13
RNF43-202ENST00000577625 NAALADL1Q9UQQ1 740 aa14.22□□□□□ -0.13
RNF43-202ENST00000577625 PLXNA3P51805 1871 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 OR4Q2P0C623 313 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 CCDC166P0CW27 439 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 STIP1P31948 543 aaKnown RBP14.21□□□□□ -0.13
RNF43-202ENST00000577625 TLE2Q04725 743 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 DEUP1Q05D60 604 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 SH2D4BQ5SQS7 431 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 RNASEH2BQ5TBB1 312 aaKnown RBP14.21□□□□□ -0.13
RNF43-202ENST00000577625 PCGF5Q86SE9 256 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 UNC45BQ8IWX7 931 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 PNPLA8Q9NP80 782 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 ADAM28Q9UKQ2 775 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 LRFN2Q9ULH4 789 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 FZD10Q9ULW2 581 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 SHOC2Q9UQ13 582 aa14.21□□□□□ -0.13
RNF43-202ENST00000577625 M0QYT0 321 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 TADA2AO75478 443 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 TMCC1O94876 653 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 TTC4O95801 387 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 LTFP02788 710 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 CYP2C18P33260 490 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 INHBCP55103 352 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 ROR1Q01973 937 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 CNPY1Q3B7I2 92 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 PM20D1Q6GTS8 502 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 NPAS4Q8IUM7 802 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 SPATA2LQ8IUW3 424 aaPredicted RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 SCML4Q8N228 414 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 DIS3LQ8TF46 1054 aaKnown RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 GATA6Q92908 595 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 PWWP2AQ96N64 755 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 TOX2Q96NM4 488 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 MARCH5Q9NX47 278 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 COMMD3-BMI1R4GMX3 469 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 LTBP2Q14767 1821 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 GREB1Q4ZG55 1949 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 SYN3O14994 580 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 CYP2F1P24903 491 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 SLC11A1P49279 550 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 KPNB1Q14974 876 aaKnown RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 SLC39A12Q504Y0 691 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 VARS2Q5ST30 1063 aaKnown RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 RASIP1Q5U651 963 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 C1orf228Q6PIY5 440 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 PYROXD2Q8N2H3 581 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 STKLD1Q8NE28 680 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 IRGQQ8WZA9 623 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 GRAMD1AQ96CP6 724 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 HAPLN3Q96S86 360 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 RBM15Q96T37 977 aaKnown RBP eCLIP14.2□□□□□ -0.141e-7■■■□□ 17
RNF43-202ENST00000577625 SPATA16Q9BXB7 569 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 PIGVQ9NUD9 493 aa14.2□□□□□ -0.14
RNF43-202ENST00000577625 DNAJC17Q9NVM6 304 aaKnown RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 RCOR3Q9P2K3 495 aaPredicted RBP14.2□□□□□ -0.14
RNF43-202ENST00000577625 SYNJ2BP-COX16A0A087WUM0 186 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 SMIM23A6NLE4 172 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 HOXA2O43364 376 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 ZFXP17010 805 aaPredicted RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 RPL22P35268 128 aaKnown RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 LSAMPQ13449 338 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 GSTA3Q16772 222 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 MFSD5Q6N075 450 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 DARS2Q6PI48 645 aaKnown RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 DEFB128Q7Z7B8 93 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 ZC3H18Q86VM9 953 aaKnown RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 FAM71DQ8N9W8 422 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 ANKLE1Q8NAG6 615 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 SLC7A14Q8TBB6 771 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 LRRC8CQ8TDW0 803 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 CSPG4P5Q96PW8 444 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 ROPN1BQ9BZX4 212 aaPredicted RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 ROPN1Q9HAT0 212 aaPredicted RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 TMPRSS4Q9NRS4 437 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 NINJ2Q9NZG7 142 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 COX16Q9P0S2 106 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 USP3Q9Y6I4 520 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 COL4A6Q14031 1691 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 CFAP69A5D8W1 941 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 H0Y3Z8 333 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 H7C0C1 242 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 CAPN9O14815 690 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 PARNO95453 639 aaKnown RBP14.19□□□□□ -0.14
RNF43-202ENST00000577625 ACSL3O95573 720 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 NCAM1P13591 858 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 ATP5OP48047 213 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 MGAT5Q09328 741 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 NME3Q13232 169 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 KYNUQ16719 465 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 C1orf53Q5VUE5 145 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 CCNJLQ8IV13 435 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 PPIL6Q8IXY8 311 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 SCAMP5Q8TAC9 235 aa14.19□□□□□ -0.14
RNF43-202ENST00000577625 ADAM32Q8TC27 787 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms