RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MMRN2Q9H8L6 949 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 SFMBT1Q9UHJ3 866 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 CLCA2Q9UQC9 943 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 FLNBO75369 2602 aaKnown RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 MYH10P35580 1976 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 EDDM13A0A1B0GTR0 161 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 J3QKU1 62 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 TLR4O00206 839 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 CBX4O00257 560 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 MID1O15344 667 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 BRINP1O60477 761 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 SIN3BO75182 1162 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 MOCS3O95396 460 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 ADH1BP00325 375 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 WNT1P04628 370 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 SLC8A1P32418 973 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 RXRGP48443 463 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 NXPH1P58417 271 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 YWHAEP62258 255 aaKnown RBP13.87□□□□□ -0.19
COPS3-214ENST00000577246 CXADRP78310 365 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 E2F1Q01094 437 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 TLE3Q04726 772 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 ADIGQ0VDE8 80 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 OVGP1Q12889 678 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 CDH18Q13634 790 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 SHBQ15464 509 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 TBC1D25Q3MII6 688 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 HS1BP3Q53T59 392 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 TAF1BQ53T94 588 aaPredicted RBP13.87□□□□□ -0.19
COPS3-214ENST00000577246 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 RNF219Q5W0B1 726 aaPredicted RBP13.87□□□□□ -0.19
COPS3-214ENST00000577246 IQCHQ86VS3 1027 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 MMAAQ8IVH4 418 aaKnown RBP13.87□□□□□ -0.19
COPS3-214ENST00000577246 DHX40Q8IX18 779 aaKnown RBP13.87□□□□□ -0.19
COPS3-214ENST00000577246 ZC3H3Q8IXZ2 948 aaKnown RBP13.87□□□□□ -0.19
COPS3-214ENST00000577246 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 FBXL13Q8NEE6 735 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 FIBINQ8TAL6 211 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 EDEM1Q92611 657 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 WBP1Q96G27 269 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 LGMNQ99538 433 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 CNGB3Q9NQW8 809 aa13.87□□□□□ -0.19
COPS3-214ENST00000577246 MUC22E2RYF6 1773 aaPredicted RBP13.86□□□□□ -0.19
COPS3-214ENST00000577246 A0A1W2PR77 199 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
COPS3-214ENST00000577246 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
COPS3-214ENST00000577246 SETSIPP0DME0 302 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 GOT1P17174 413 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 C5AR1P21730 350 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 ACP1P24666 158 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 CSKP41240 450 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 MXI1P50539 228 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 CLDN6P56747 220 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 RHDQ02161 417 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 CCDC173Q0VFZ6 552 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 ATL3Q6DD88 541 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 NAPEPLDQ6IQ20 393 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 MSANTD2Q6P1R3 559 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 BHLHA9Q7RTU4 235 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 SPACA3Q8IXA5 215 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 SCML4Q8N228 414 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 DCBLD1Q8N8Z6 715 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 MFSD2AQ8NA29 543 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 OR14C36Q8NHC7 312 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 KCTD13Q8WZ19 329 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 PAGE5Q96GU1 130 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 KDM4CQ9H3R0 1056 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 SERGEFQ9UGK8 458 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 USP25Q9UHP3 1055 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 SERTAD1Q9UHV2 236 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 TSPAN16Q9UKR8 245 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 CEP83Q9Y592 693 aa13.86□□□□□ -0.19
COPS3-214ENST00000577246 GOLGA4Q13439 2230 aaKnown RBP13.85□□□□□ -0.19
COPS3-214ENST00000577246 YJEFN3A6XGL0 299 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 E7ENQ6 273 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 ACSL4O60488 711 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 IGLV3-27P01718 113 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 NNMTP40261 264 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 SGSHP51688 502 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 ADPRHP54922 357 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 PCBP4P57723 403 aaKnown RBP13.85□□□□□ -0.19
COPS3-214ENST00000577246 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 KCNJ12Q14500 433 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 RFWD3Q6PCD5 774 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 PRPF39Q86UA1 669 aaKnown RBP13.85□□□□□ -0.19
COPS3-214ENST00000577246 LSMEM2Q8N112 164 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 WFDC5Q8TCV5 224 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 IRGQQ8WZA9 623 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
COPS3-214ENST00000577246 MYO19Q96H55 970 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 ZNF578Q96N58 590 aaPredicted RBP13.85□□□□□ -0.19
COPS3-214ENST00000577246 MTG2Q9H4K7 406 aa13.85□□□□□ -0.19
COPS3-214ENST00000577246 EBF2Q9HAK2 575 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms