RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 LMLNQ96KR4 655 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 PRICKLE1Q96MT3 831 aaPredicted RBP12.26□□□□□ -0.45
CDH8-202ENST00000577228 SLC6A18Q96N87 628 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 DDX50Q9BQ39 737 aaKnown RBP12.26□□□□□ -0.45
CDH8-202ENST00000577228 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 SCAND2PQ9GZW5 306 aaPredicted RBP12.26□□□□□ -0.45
CDH8-202ENST00000577228 RMND1Q9NWS8 449 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 FBXL12Q9NXK8 326 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 ARMCX3Q9UH62 379 aaPredicted RBP12.26□□□□□ -0.45
CDH8-202ENST00000577228 ZDHHC9Q9Y397 364 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 WDFY3Q8IZQ1 3526 aa12.26□□□□□ -0.45
CDH8-202ENST00000577228 GOLGA4Q13439 2230 aaKnown RBP12.26□□□□□ -0.45
CDH8-202ENST00000577228 A0A1B0GTQ1 180 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 A0A1W2PPC4 97 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 PAPSS1O43252 624 aaPredicted RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 GABBR2O75899 941 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 FBXO21O94952 628 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 GALCP54803 685 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 RPS24P62847 133 aaKnown RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 PNOCQ13519 176 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 CDH18Q13634 790 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 CST6Q15828 149 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 CNGA2Q16280 664 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 HNRNPA1L2Q32P51 320 aaKnown RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 ANKRD40Q6AI12 368 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 NCEH1Q6PIU2 408 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 DHX40Q8IX18 779 aaKnown RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 CARNMT1Q8N4J0 409 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 CLEC4CQ8WTT0 213 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 SLC35C1Q96A29 364 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 AZIN2Q96A70 460 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 SKA1Q96BD8 255 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 LRIG1Q96JA1 1093 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 NT5C1BQ96P26 610 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 AASDHPPTQ9NRN7 309 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 SERGEFQ9UGK8 458 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 INTS6Q9UL03 887 aaKnown RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 PCDHB4Q9Y5E5 795 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 ATP6V1DQ9Y5K8 247 aa12.25□□□□□ -0.45
CDH8-202ENST00000577228 URB1O60287 2271 aaKnown RBP12.25□□□□□ -0.45
CDH8-202ENST00000577228 A0A1W2PP55 124 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 LRRC72A6NJI9 287 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 MID1O15344 667 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 RNASEH2AO75792 299 aaKnown RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 BRD2P25440 801 aaKnown RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 PMS1P54277 932 aaKnown RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 STILQ15468 1287 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 COBLL1Q53SF7 1204 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 PITRM1Q5JRX3 1037 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 ZNF658Q5TYW1 1059 aaPredicted RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 GATAD2AQ86YP4 633 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 MMAAQ8IVH4 418 aaKnown RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 SCUBE3Q8IX30 993 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 KDM1BQ8NB78 822 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 OR2T34Q8NGX1 318 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 DQX1Q8TE96 717 aaKnown RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 MYEOVQ96EZ4 313 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 FCRL2Q96LA5 508 aaPredicted RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 MRGPRX3Q96LB0 322 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 HSFY1Q96LI6 401 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 SERPINB11Q96P15 392 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 ELF4Q99607 663 aaPredicted RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 OMDQ99983 421 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 MIS12Q9H081 205 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 NUCKS1Q9H1E3 243 aaKnown RBP12.24□□□□□ -0.45
CDH8-202ENST00000577228 NEUROG2Q9H2A3 272 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 FZD4Q9ULV1 537 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 ERVW-1Q9UQF0 538 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
CDH8-202ENST00000577228 EDDM13A0A1B0GTR0 161 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 TARSL2A2RTX5 802 aaKnown RBP12.23□□□□□ -0.45
CDH8-202ENST00000577228 TRIM49BA6NDI0 452 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 TTC34A8MYJ7 566 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 E9PAM4 449 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 ENC1O14682 589 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
CDH8-202ENST00000577228 MOCS3O95396 460 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 MOCS2O96007 188 aaPredicted RBP12.23□□□□□ -0.45
CDH8-202ENST00000577228 WNT1P04628 370 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 SRPRAP08240 638 aaKnown RBP12.23□□□□□ -0.45
CDH8-202ENST00000577228 ABCB4P21439 1286 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 SLC8A1P32418 973 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 CTSOP43234 321 aaPredicted RBP12.23□□□□□ -0.45
CDH8-202ENST00000577228 PSMD8P48556 350 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 FMO5P49326 533 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 CCR5P51681 352 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 LRRC63Q05C16 580 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 NNTQ13423 1086 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 ARID5BQ14865 1188 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 MS4A13Q5J8X5 152 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 PRAMEF14Q5SWL7 426 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 C9orf64Q5T6V5 341 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
CDH8-202ENST00000577228 MMS22LQ6ZRQ5 1243 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 TMPRSS12Q86WS5 348 aa12.23□□□□□ -0.45
CDH8-202ENST00000577228 CFAP52Q8N1V2 620 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms