RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DDIT4Q9NX09 232 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC7A8Q9UHI5 535 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 KCNK1O00180 336 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CYB561D2O14569 222 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 GAS2O43903 313 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 SIN3BO75182 1162 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 GSNP06396 782 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLC22A9Q8IVM8 553 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 SLCO2A1Q92959 643 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 RNF145Q96MT1 663 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 NOCTQ9UK39 431 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 ANKRD6Q9Y2G4 727 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 XRN1Q8IZH2 1706 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CLUHO75153 1309 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CLASP2O75122 1294 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CCDC166P0CW27 439 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CHRNB2P17787 502 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 CBX3Q13185 183 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 C15orf59Q2T9L4 293 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 TNS4Q8IZW8 715 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 ZFYVE19Q96K21 471 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 DNAJC1Q96KC8 554 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 FAM84AQ96KN4 292 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 DHX33Q9H6R0 707 aaKnown RBP13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 DNAJB4Q9UDY4 337 aa13.4□□□□□ -0.26
PCDHGB3-201ENST00000576222 PTGES3LE9PB15 166 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 SOAT2O75908 522 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CRHR1P34998 444 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RSBN1Q5VWQ0 802 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 NANOGNBQ7Z5D8 188 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 ENDOVQ8N8Q3 282 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RAP2CQ9Y3L5 183 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 BCL9O00512 1426 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 USP12O75317 370 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 TRUB2O95900 331 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 ECHS1P30084 290 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 IL5RAQ01344 420 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 POU4F1Q01851 419 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 ATP6AP1LQ52LC2 224 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 PERM1Q5SV97 790 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 C6orf52Q5T4I8 152 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 ANKRD22Q5VYY1 191 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 MAGEE2Q8TD90 523 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RORBQ92753 470 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 APBA2Q99767 749 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CAB39Q9Y376 341 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RGS5O15539 181 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RHOBTB1O94844 696 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CXCL8P10145 99 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 TCF7P36402 384 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CD151P48509 253 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 SCNN1BP51168 640 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 SLC18A1P54219 525 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 PGM5Q15124 567 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 ABRAXAS1Q6UWZ7 409 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 SAMD3Q8N6K7 520 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CIDEBQ9UHD4 219 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 TMEM114B3SHH9 223 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 MMP8P22894 467 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CAP2P40123 477 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 NEK3P51956 506 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CDH17Q12864 832 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 INAQ16352 499 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 AMHR2Q16671 573 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 DGUOKQ16854 277 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 GALNTL6Q49A17 601 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 FAM98BQ52LJ0 330 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RALGPS1Q5JS13 557 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 URGCPQ8TCY9 931 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 SEC14L1Q92503 715 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CERS2Q96G23 380 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 MTG1Q9BT17 334 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 DGCR6LQ9BY27 220 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 RMI1Q9H9A7 625 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 EFR3BQ9Y2G0 817 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 GAKO14976 1311 aa13.39□□□□□ -0.27
PCDHGB3-201ENST00000576222 CD4P01730 458 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 NDST1P52848 882 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 NAA20P61599 178 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 CDH19Q9H159 772 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 CATSPERBQ9H7T0 1116 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 HACD1B0YJ81 288 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 E5RJQ4 531 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 STAG3L1P0CL83 205 aa13.38□□□□□ -0.27
PCDHGB3-201ENST00000576222 CCNA2P20248 432 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms