RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 HS1BP3Q53T59 392 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 C9orf64Q5T6V5 341 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 NAPEPLDQ6IQ20 393 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 RFWD3Q6PCD5 774 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 SND1Q7KZF4 910 aaKnown RBP eCLIP16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 SV2AQ7L0J3 742 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 SLC25A45Q8N413 288 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 AADATQ8N5Z0 425 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 SNRNP27Q8WVK2 155 aaKnown RBP16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 MYO19Q96H55 970 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 HEXIM2Q96MH2 286 aaKnown RBP16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 DEPDC7Q96QD5 511 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 FAM117AQ9C073 453 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 POLR1BQ9H9Y6 1135 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 THSD1Q9NS62 852 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 STIM2Q9P246 746 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 CSO75390 466 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 DXOO77932 396 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 HLA-DRAP01903 254 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 SLFN14P0C7P3 912 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 MAT2AP31153 395 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 CSKP41240 450 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 TKTL1P51854 596 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 ADPRHP54922 357 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 PPP2CBP62714 309 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 PPP2CAP67775 309 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 RABEP1Q15276 862 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 KMT5BQ4FZB7 885 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 CDCP2Q5VXM1 449 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 PRPF39Q86UA1 669 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 PIGZQ86VD9 579 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 RNF139Q8WU17 664 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 EDEM1Q92611 657 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 DHX58Q96C10 678 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 ABCG4Q9H172 646 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 STOML2Q9UJZ1 356 aa16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 HBS1LQ9Y450 684 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-211ENST00000575783 PLXNA2O75051 1894 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 MYH10P35580 1976 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 TTC34A8MYJ7 566 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 FFAR2O15552 330 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 MAGEC1O60732 1142 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 ZBED1O96006 694 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 MYF5P13349 255 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 CASP1P29466 404 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 STAT4Q14765 748 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 COLEC12Q5KU26 742 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 MFN1Q8IWA4 741 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 TTC17Q96AE7 1141 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 MRGPRX3Q96LB0 322 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 FAM129BQ96TA1 746 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 ULBP1Q9BZM6 244 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 APOBEC3GQ9HC16 384 aaKnown RBP16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 ASCL3Q9NQ33 180 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 OLA1Q9NTK5 396 aaKnown RBP16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 WDR70Q9NW82 654 aa16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 UBR5O95071 2799 aaPredicted RBP16.9■□□□□ 0.3
CTDNEP1-211ENST00000575783 PTPN13Q12923 2485 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 A0A1B0GVM2 712 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 C10orf142B7Z368 130 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 K7ENP7 123 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 MSI1O43347 362 aaKnown RBP16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 LATO43561 262 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 IL1BP01584 269 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 DGKAP23743 735 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 RBMS1P29558 406 aaKnown RBP16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 SLC39A14Q15043 492 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 E2F4Q16254 413 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 RAB41Q5JT25 222 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 C6orf132Q5T0Z8 1188 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 PIK3R6Q5UE93 754 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 INO80CQ6PI98 192 aaPredicted RBP16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 CCDC81Q6ZN84 652 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 STK40Q8N2I9 435 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 GOLGA5Q8TBA6 731 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 UBXN6Q9BZV1 441 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 IMPG2Q9BZV3 1241 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 BLZF1Q9H2G9 400 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 UCKL1Q9NWZ5 548 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 ARHGAP20Q9P2F6 1191 aa16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 TPX2Q9ULW0 747 aaKnown RBP16.89■□□□□ 0.29
CTDNEP1-211ENST00000575783 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 ASLP04424 464 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 C5AR1P21730 350 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 CTSOP43234 321 aaPredicted RBP16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 SLC8A3P57103 927 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 POM121L1PQ3SYA9 428 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 C3orf38Q5JPI3 329 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 MPP7Q5T2T1 576 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 PM20D1Q6GTS8 502 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 IQCHQ86VS3 1027 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 OR4C6Q8NH72 309 aa16.88■□□□□ 0.29
CTDNEP1-211ENST00000575783 LMLNQ96KR4 655 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms