RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 PTPN20Q4JDL3 420 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 TRIM61Q5EBN2 209 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 TCEAL6Q6IPX3 200 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 SND1Q7KZF4 910 aaKnown RBP eCLIP17.07■□□□□ 0.32
TVP23B-206ENST00000574226 ARMCX6Q7L4S7 300 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 ERICH1Q86X53 443 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 CARNMT1Q8N4J0 409 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 SORCS1Q8WY21 1168 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 TCEAL3Q969E4 200 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 PRICKLE1Q96MT3 831 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-206ENST00000574226 NUP58Q9BVL2 599 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 NAT10Q9H0A0 1025 aaKnown RBP17.07■□□□□ 0.32
TVP23B-206ENST00000574226 NUCKS1Q9H1E3 243 aaKnown RBP17.07■□□□□ 0.32
TVP23B-206ENST00000574226 VPS16Q9H269 839 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 SMOC1Q9H4F8 434 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 RXFP3Q9NSD7 469 aa17.07■□□□□ 0.32
TVP23B-206ENST00000574226 WSB2Q9NYS7 404 aaPredicted RBP17.07■□□□□ 0.32
TVP23B-206ENST00000574226 DNAH14Q0VDD8 3507 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 CACNA1EQ15878 2313 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 MED19A0JLT2 244 aaPredicted RBP17.06■□□□□ 0.32
TVP23B-206ENST00000574226 LRRC10BA6NIK2 292 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 ERBB2P04626 1255 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 SRPRAP08240 638 aaKnown RBP17.06■□□□□ 0.32
TVP23B-206ENST00000574226 SERPINF2P08697 491 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 GNSP15586 552 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 ITPKAP23677 461 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 CD70P32970 193 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 TPMTP51580 245 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 COPAP53621 1224 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 GFPT1Q06210 699 aaPredicted RBP17.06■□□□□ 0.32
TVP23B-206ENST00000574226 SULT2A1Q06520 285 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 PTPRNQ16849 979 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 PPM1JQ5JR12 505 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 BRMS1LQ5PSV4 323 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 LMLNQ96KR4 655 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 HSPA12BQ96MM6 686 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 FANCLQ9NW38 375 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.06■□□□□ 0.32
TVP23B-206ENST00000574226 SCML1Q9UN30 329 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 SLC6A14Q9UN76 642 aa17.06■□□□□ 0.32
TVP23B-206ENST00000574226 MUC22E2RYF6 1773 aaPredicted RBP17.05■□□□□ 0.32
TVP23B-206ENST00000574226 A0A1B0GVM2 712 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 TCAF2A6NFQ2 919 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 PNMA6AP0CW24 399 aaPredicted RBP17.05■□□□□ 0.32
TVP23B-206ENST00000574226 NNMTP40261 264 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 CSKP41240 450 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 IRX4P78413 519 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 RAP1GAP2Q684P5 730 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 ARCQ7LC44 396 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 WFDC5Q8TCV5 224 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 EPS8L1Q8TE68 723 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 CYB5D2Q8WUJ1 264 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
TVP23B-206ENST00000574226 TOE1Q96GM8 510 aaKnown RBP17.05■□□□□ 0.32
TVP23B-206ENST00000574226 SPAG5Q96R06 1193 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 PRMT1Q99873 361 aaKnown RBP17.05■□□□□ 0.32
TVP23B-206ENST00000574226 TMEM74BQ9NUR3 256 aa17.05■□□□□ 0.32
TVP23B-206ENST00000574226 LIMA1Q9UHB6 759 aaKnown RBP17.05■□□□□ 0.32
TVP23B-206ENST00000574226 TARSL2A2RTX5 802 aaKnown RBP17.04■□□□□ 0.32
TVP23B-206ENST00000574226 C4orf47A7E2U8 309 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 M0QYT0 321 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 RNASEH1O60930 286 aaKnown RBP17.04■□□□□ 0.32
TVP23B-206ENST00000574226 GRAP2O75791 330 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 DNTTP04053 509 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 CFIP05156 583 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 SYPP08247 313 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
TVP23B-206ENST00000574226 HNRNPA1L2Q32P51 320 aaKnown RBP17.04■□□□□ 0.32
TVP23B-206ENST00000574226 TTC31Q49AM3 519 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-206ENST00000574226 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 RNF219Q5W0B1 726 aaPredicted RBP17.04■□□□□ 0.32
TVP23B-206ENST00000574226 TRIM72Q6ZMU5 477 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 SLC41A1Q8IVJ1 513 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 RGL4Q8IZJ4 473 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 CFAP52Q8N1V2 620 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 DNASE2BQ8WZ79 361 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 NT5C3BQ969T7 300 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 NPY6RQ99463 290 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 SLC6A17Q9H1V8 727 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 GANQ9H2C0 597 aa17.04■□□□□ 0.32
TVP23B-206ENST00000574226 LAMA1P25391 3075 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 LGALS16A8MUM7 142 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 PATE3B3GLJ2 98 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ADRB1P08588 477 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 HLA-EP13747 358 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 SOX5P35711 763 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 STAT1P42224 750 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 VASPP50552 380 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 PLK1P53350 603 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 COPB1P53618 953 aaKnown RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ATXN3P54252 364 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 PITX1P78337 314 aaPredicted RBP17.03■□□□□ 0.32
TVP23B-206ENST00000574226 ECT2LQ008S8 904 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 CDR2Q01850 454 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 NME3Q13232 169 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 PLEKHG6Q3KR16 790 aa17.03■□□□□ 0.32
TVP23B-206ENST00000574226 SLC25A52Q3SY17 297 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms