RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, human

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAP1-208	ENST00000573872	GOLGA6L6	A8MZA4	724 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	PRRT4	C9JH25	899 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872		E9PAM4	449 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	RNF8	O76064	485 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	LUC7L3	O95232	432 aa	Known RBP	13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	DES	P17661	470 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	MIP	P30301	263 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	MAGEA1	P43355	309 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	TNFRSF4	P43489	277 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	KIR2DL1	P43626	348 aa	Predicted RBP	13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	SEMA3B	Q13214	749 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	GEN1	Q17RS7	908 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	RABGAP1L	Q5R372	815 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	SCYL2	Q6P3W7	929 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	MAMSTR	Q6ZN01	415 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	SLFN11	Q7Z7L1	901 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	RHOT2	Q8IXI1	618 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	SLC35G2	Q8TBE7	412 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	RPRD1A	Q96P16	312 aa	Predicted RBP	13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	NCAPG	Q9BPX3	1015 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	IER2	Q9BTL4	223 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	STIM2	Q9P246	746 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	ZNF212	Q9UDV6	495 aa		13.58	□□□□□ -0.24
TRAP1-208	ENST00000573872	TYW5	A2RUC4	315 aa	Known RBP	13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	RCCD1	A6NED2	376 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	CHURC1-FNTB	B4DL54	471 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	FAM72C	H0Y354	149 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	MYO1F	O00160	1098 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	RNF40	O75150	1001 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	TCF4	P15884	667 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	IL1R2	P27930	398 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	HOXC13	P31276	330 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	HADHB	P55084	474 aa	Known RBP	13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	SPA17	Q15506	151 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	ALF	Q53S48	1182 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	FSCB	Q5H9T9	825 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	FAM72A	Q5TYM5	149 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	DAB2IP	Q5VWQ8	1189 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	TMEM215	Q68D42	235 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	FAM72D	Q6L9T8	149 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	CXorf57	Q6NSI4	855 aa	Known RBP	13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	PKN3	Q6P5Z2	889 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	CHST9	Q7L1S5	443 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	ANKS1B	Q7Z6G8	1248 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	FAM72B	Q86X60	149 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	CIR1	Q86X95	450 aa	Predicted RBP	13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	MFN1	Q8IWA4	741 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	CCAR2	Q8N163	923 aa	Known RBP	13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	PYROXD2	Q8N2H3	581 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	ZNF557	Q8N988	423 aa	Predicted RBP	13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	USP33	Q8TEY7	942 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	OR12D3	Q9UGF7	316 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	USP18	Q9UMW8	372 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	TFR2	Q9UP52	801 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	ATG2B	Q96BY7	2078 aa		13.57	□□□□□ -0.24
TRAP1-208	ENST00000573872	MYO18A	Q92614	2054 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872		A0A0A6YYK5	440 aa	Predicted RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	TBC1D3B	A6NDS4	549 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CLDN11	O75508	207 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CNTN5	O94779	1100 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	LRIG2	O94898	1065 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	PROSC	O94903	275 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	PABPC1	P11940	636 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	L1CAM	P32004	1257 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CD70	P32970	193 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	MAN1A1	P33908	653 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	NUBP1	P53384	320 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CDH4	P55283	916 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	MRPS21	P82921	87 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	SLC25A11	Q02978	314 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	LMAN2	Q12907	356 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	MTAP	Q13126	283 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CA9	Q16790	459 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	EFHC2	Q5JST6	749 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	ERMARD	Q5T6L9	678 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	EMC10	Q5UCC4	262 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	TXNRD3NB	Q6F5E7	133 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	LRRC31	Q6UY01	552 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	ADIPOR2	Q86V24	386 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	NLRP14	Q86W24	1093 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CPNE8	Q86YQ8	564 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	PSTK	Q8IV42	348 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	LRRC8A	Q8IWT6	810 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	CARNMT1	Q8N4J0	409 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	DTWD2	Q8NBA8	298 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	ACRBP	Q8NEB7	543 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	OR52K2	Q8NGK3	314 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	KCNV2	Q8TDN2	545 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	WFIKKN2	Q8TEU8	576 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	SNRNP25	Q9BV90	132 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	ABCB8	Q9NUT2	735 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	MPP6	Q9NZW5	540 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	PCSK1N	Q9UHG2	260 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	LCMT1	Q9UIC8	334 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	GGA2	Q9UJY4	613 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	INTS6	Q9UL03	887 aa	Known RBP	13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	AP4E1	Q9UPM8	1137 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	TBC1D30	Q9Y2I9	924 aa		13.56	□□□□□ -0.24
TRAP1-208	ENST00000573872	BTNL10	A8MVZ5	291 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms