RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZDHHC4Q9NPG8 344 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 DNAJC17Q9NVM6 304 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 PLK2Q9NYY3 685 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 SFMBT1Q9UHJ3 866 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 DMGDHQ9UI17 866 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 FBXO10Q9UK96 956 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 AGO1Q9UL18 857 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 USP18Q9UMW8 372 aa7.76□□□□□ -1.17
NUP88-205ENST00000572809 HBS1LQ9Y450 684 aaKnown RBP7.76□□□□□ -1.17
NUP88-205ENST00000572809 MYO16Q9Y6X6 1858 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 A0A1W2PNR3 127 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 PRR5-ARHGAP8B1AHC4 643 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 PRRT4C9JH25 899 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 GNB5O14775 395 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 DCLK1O15075 740 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 THAP12O43422 761 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 LRP3O75074 770 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 RHOBTB1O94844 696 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 FBXO21O94952 628 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 LTFP02788 710 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 CYBBP04839 570 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 HNRNPLP14866 589 aaKnown RBP eCLIP7.75□□□□□ -1.17
NUP88-205ENST00000572809 EPB42P16452 691 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 SDHBP21912 280 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 PON1P27169 355 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 GNA15P30679 374 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 NTSR1P30989 418 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 USP8P40818 1118 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 ACADSBP45954 432 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 RPL34P49207 117 aaKnown RBP7.75□□□□□ -1.17
NUP88-205ENST00000572809 ARHGAP8P85298 464 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 CSRP2Q16527 193 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 MAN2A1Q16706 1144 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 DPCR1Q3MIW9 517 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 VWA3BQ502W6 1294 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 FYB2Q5VWT5 728 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 ANO7Q6IWH7 933 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 LRRC69Q6ZNQ3 347 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 TOGARAM2Q6ZUX3 1019 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 TRMT11Q7Z4G4 463 aaKnown RBP7.75□□□□□ -1.17
NUP88-205ENST00000572809 BTLAQ7Z6A9 289 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 RASSF3Q86WH2 238 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 CPXM2Q8N436 756 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 DDI1Q8WTU0 396 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 RMDN1Q96DB5 314 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 HSH2DQ96JZ2 352 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 GBP4Q96PP9 640 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 TUBGCP2Q9BSJ2 902 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 TPSD1Q9BZJ3 242 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 MIS12Q9H081 205 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 DUSP15Q9H1R2 295 aaPredicted RBP7.75□□□□□ -1.17
NUP88-205ENST00000572809 ARRDC1-AS1Q9H2J1 176 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 NDST4Q9H3R1 872 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 ST7Q9NRC1 585 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 SEMA4GQ9NTN9 838 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 APEX2Q9UBZ4 518 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 HCN2Q9UL51 889 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 INVSQ9Y283 1065 aa7.75□□□□□ -1.17
NUP88-205ENST00000572809 OTOGLQ3ZCN5 2332 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 BECN2A8MW95 431 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 GOLGA6L22H0YM25 854 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 FOXN3O00409 490 aaPredicted RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 FOXD2O60548 495 aaPredicted RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 TSPAN3O60637 253 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 PENKP01210 267 aaPredicted RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 ZNF806P0C7X5 589 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 NCAM1P13591 858 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 GBP1P32455 592 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 WASP42768 502 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 APBA1Q02410 837 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 LMNB2Q03252 620 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 BYSLQ13895 437 aaKnown RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 PUM1Q14671 1186 aaKnown RBP eCLIP7.74□□□□□ -1.17
NUP88-205ENST00000572809 ELF2Q15723 593 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 MEA1Q16626 185 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 PLK5Q496M5 336 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 MPPE1Q53F39 396 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 HSP90AA4PQ58FG1 418 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 ADGRF1Q5T601 910 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 MSANTD2Q6P1R3 559 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 DENND1BQ6P3S1 775 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 XKR5Q6UX68 686 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 TMEM110Q86TL2 294 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 C11orf74Q86VG3 221 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 UNC45BQ8IWX7 931 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 FAM217AQ8IXS0 508 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 CHPFQ8IZ52 775 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 MDGA1Q8NFP4 955 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 OLIG1Q8TAK6 271 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 CLEC4CQ8WTT0 213 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 SHC3Q92529 594 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 TMA16Q96EY4 203 aaKnown RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 P2RY11Q96G91 374 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 ACOX2Q99424 681 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 SLC2A11Q9BYW1 496 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 ACP6Q9NPH0 428 aa7.74□□□□□ -1.17
NUP88-205ENST00000572809 SAMSN1Q9NSI8 373 aaKnown RBP7.74□□□□□ -1.17
NUP88-205ENST00000572809 BCCIPQ9P287 314 aaKnown RBP eCLIP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms