RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ATXN3P54252 364 aaPredicted RBP18.76■□□□□ 0.59
CHD3-214ENST00000572579 SIM1P81133 766 aaPredicted RBP18.76■□□□□ 0.59
CHD3-214ENST00000572579 EXOC3L4Q17RC7 722 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 C9orf64Q5T6V5 341 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 RAP1GAP2Q684P5 730 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 LGI2Q8N0V4 545 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 CARNMT1Q8N4J0 409 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 SLC2A13Q96QE2 648 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 SCNM1Q9BWG6 230 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 THAP9Q9H5L6 903 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 POPDC2Q9HBU9 364 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 SERGEFQ9UGK8 458 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 SLCO3A1Q9UIG8 710 aa18.76■□□□□ 0.59
CHD3-214ENST00000572579 CEP192Q8TEP8 1941 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 GTPBP10A4D1E9 387 aaKnown RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 TTC34A8MYJ7 566 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 C10orf142B7Z368 130 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 BCAT2O15382 392 aaPredicted RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 SART1O43290 800 aaKnown RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 HYAL3O43820 417 aaPredicted RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 SIN3BO75182 1162 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 GRAP2O75791 330 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 ERBB2P04626 1255 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 SYPP08247 313 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 POLR2EP19388 210 aaKnown RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 TACR2P21452 398 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 IRAK1P51617 712 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 KCNMA1Q12791 1236 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 DPCR1Q3MIW9 517 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 PITRM1Q5JRX3 1037 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 KCNT1Q5JUK3 1230 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 MIIPQ5JXC2 388 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 SLC47A2Q86VL8 602 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 CIR1Q86X95 450 aaPredicted RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 DEFB106AQ8N104 65 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 HDDC3Q8N4P3 179 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 MLKLQ8NB16 471 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 RSPH9Q9H1X1 276 aaPredicted RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 SUSD2Q9UGT4 822 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 PCDHGC3Q9UN70 934 aa18.75■□□□□ 0.59
CHD3-214ENST00000572579 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.75■□□□□ 0.59
CHD3-214ENST00000572579 IGF2RP11717 2491 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 CAPN9O14815 690 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 CBFA2T3O75081 653 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 LUC7L3O95232 432 aaKnown RBP18.74■□□□□ 0.59
CHD3-214ENST00000572579 GNSP15586 552 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 CSNK1EP49674 416 aaKnown RBP18.74■□□□□ 0.59
CHD3-214ENST00000572579 ARID5BQ14865 1188 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 E2F5Q15329 346 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 HNRNPA1L2Q32P51 320 aaKnown RBP18.74■□□□□ 0.59
CHD3-214ENST00000572579 ARTNQ5T4W7 220 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 OTUD1Q5VV17 481 aaPredicted RBP18.74■□□□□ 0.59
CHD3-214ENST00000572579 OLFML1Q6UWY5 402 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 OR52K2Q8NGK3 314 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 GATA6Q92908 595 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 BIRC7Q96CA5 298 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 PPP1R13BQ96KQ4 1090 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 FAM129BQ96TA1 746 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 SLC32A1Q9H598 525 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 PLCB1Q9NQ66 1216 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 ANLNQ9NQW6 1124 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 DNAJC12Q9UKB3 198 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 ERVW-1Q9UQF0 538 aa18.74■□□□□ 0.59
CHD3-214ENST00000572579 FNDC3AQ9Y2H6 1198 aaKnown RBP18.74■□□□□ 0.59
CHD3-214ENST00000572579 A0A1B0GVT2 93 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 I6L893 689 aaPredicted RBP18.73■□□□□ 0.59
CHD3-214ENST00000572579 PROS1P07225 676 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 TFE3P19532 575 aaPredicted RBP18.73■□□□□ 0.59
CHD3-214ENST00000572579 MZF1P28698 734 aaPredicted RBP18.73■□□□□ 0.59
CHD3-214ENST00000572579 PTPN20Q4JDL3 420 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 HSP90AA4PQ58FG1 418 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 LAYNQ6UX15 382 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 FAM183BPQ6ZVS7 135 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 DHX40Q8IX18 779 aaKnown RBP18.73■□□□□ 0.59
CHD3-214ENST00000572579 C1orf131Q8NDD1 294 aaKnown RBP18.73■□□□□ 0.59
CHD3-214ENST00000572579 IGSF8Q969P0 613 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 BTN2A3PQ96KV6 586 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 DDX50Q9BQ39 737 aaKnown RBP18.73■□□□□ 0.59
CHD3-214ENST00000572579 EBF2Q9HAK2 575 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 SUN2Q9UH99 717 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 KLK13Q9UKR3 277 aa18.73■□□□□ 0.59
CHD3-214ENST00000572579 FREM2Q5SZK8 3169 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 SEMA4FO95754 770 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 IGHV4-34P06331 123 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 VAV1P15498 845 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 MTIF2P46199 727 aaKnown RBP18.72■□□□□ 0.59
CHD3-214ENST00000572579 STK19P49842 368 aaPredicted RBP18.72■□□□□ 0.59
CHD3-214ENST00000572579 ZBTB16Q05516 673 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 SLC14A1Q13336 389 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 KIF19Q2TAC6 998 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 HLA-BQ31612 363 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 CXorf57Q6NSI4 855 aaKnown RBP18.72■□□□□ 0.59
CHD3-214ENST00000572579 FBXL22Q6P050 247 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 UNQ6494/PRO21346Q6UXR6 183 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 DBX2Q6ZNG2 339 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 C14orf80Q86SX3 495 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 CHSY1Q86X52 802 aa18.72■□□□□ 0.59
CHD3-214ENST00000572579 FAM71AQ8IYT1 594 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms