RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
NPLOC4-208ENST00000572351 PIAS3Q9Y6X2 628 aa9.74□□□□□ -0.85
NPLOC4-208ENST00000572351 MTCL1Q9Y4B5 1905 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-208ENST00000572351 MYO9BQ13459 2157 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 A0A1B0GVM2 712 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 TCAF2A6NFQ2 919 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PI4K2BG5E9Z4 385 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 ARNTLO00327 626 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 FGF10O15520 208 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 CLDN11O75508 207 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 ZRANB2O95218 330 aaKnown RBP eCLIP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 LUC7L3O95232 432 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PENKP01210 267 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RHOQP17081 205 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 GOT1P17174 413 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 CTNNA2P26232 953 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 GJA4P35212 333 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 DEKP35659 375 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 SOX9P48436 509 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 MARCKSL1P49006 195 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 CDH4P55283 916 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RWDD2BP57060 319 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 NRG1Q02297 640 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PREPLQ4J6C6 727 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 ATP13A4Q4VNC1 1196 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 MPP7Q5T2T1 576 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 C6orf118Q5T5N4 469 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RFX8Q6ZV50 586 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 CYP4V2Q6ZWL3 525 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 CHST9Q7L1S5 443 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 KATNAL2Q8IYT4 538 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RCOR2Q8IZ40 523 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 UBE2Q2Q8WVN8 375 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RAPGEF5Q92565 580 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 KRT35Q92764 455 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 MYEOVQ96EZ4 313 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 MSANTD3Q96H12 275 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RBM41Q96IZ5 413 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 ZNF670Q9BS34 389 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 C8orf33Q9H7E9 229 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 HEBP1Q9NRV9 189 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 DNAJC17Q9NVM6 304 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 RCOR3Q9P2K3 495 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 DEC1Q9P2X7 70 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PPARGC1AQ9UBK2 798 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 CA14Q9ULX7 337 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PACSIN2Q9UNF0 486 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 PCDHA3Q9Y5H8 950 aa9.73□□□□□ -0.85
NPLOC4-208ENST00000572351 MYO16Q9Y6X6 1858 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 IGLV3-10A0A075B6K4 115 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 OTOL1A6NHN0 477 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 DRGXA6NNA5 263 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 SPECC1L-ADORA2AF8WAN1 911 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 TULP3O75386 442 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CNTN5O94779 1100 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 RHOCP08134 193 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CD48P09326 243 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 KDELR1P24390 212 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 HOXD9P28356 352 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 OR1E1P30953 314 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CTHP32929 405 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 DGKGP49619 791 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 IRAK1P51617 712 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 OXCT1P55809 520 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 KDSRQ06136 332 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 SEMA3BQ13214 749 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 DPYSL3Q14195 570 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 MLF2Q15773 248 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 SLC44A4Q53GD3 710 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 ALFQ53S48 1182 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 MANEALQ5VSG8 457 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 GRAMD4Q6IC98 578 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 C1orf228Q6PIY5 440 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 TPRG1Q6ZUI0 275 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 NUDT18Q6ZVK8 323 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 RALGPS2Q86X27 583 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 ZNF354CQ86Y25 554 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 ZNF683Q8IZ20 524 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 SLC35F6Q8N357 371 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 RTL3Q8N8U3 475 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 EXD1Q8NHP7 514 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CD101Q93033 1021 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 SHDQ96IW2 340 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CSPG4P5Q96PW8 444 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 PNKPQ96T60 521 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 P2RY13Q9BPV8 354 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 MUC3BQ9H195 1237 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CD320Q9NPF0 282 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 ARHGEF4Q9NR80 690 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 KCND1Q9NSA2 647 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 CWC15Q9P013 229 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 KIAA1522Q9P206 1035 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 JRKLQ9Y4A0 524 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
NPLOC4-208ENST00000572351 GFRA2O00451 464 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms