RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	HS6ST2	Q96MM7	605 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF48	Q96MX3	618 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	TSPAN18	Q96SJ8	248 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	SACM1L	Q9NTJ5	587 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	GAR1	Q9NY12	217 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	ELOVL5	Q9NYP7	299 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	FBXO2	Q9UK22	296 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	HDAC9	Q9UKV0	1011 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	OGDHL	Q9ULD0	1010 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	SCAF8	Q9UPN6	1271 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	UBR3	Q6ZT12	1888 aa		4.06	□□□□□ -1.76
CDC27-213	ENST00000571643	HEG1	Q9ULI3	1381 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	TCRBV5S1A1T	A0A578	114 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	GOLGA6C	A6NDK9	693 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	GOLGA6B	A6NDN3	693 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643		A8MVJ9	347 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	TMEM233	B4DJY2	109 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	GOLIM4	O00461	696 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	SOCS2	O14508	198 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	CLGN	O14967	610 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	VNN1	O95497	513 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	SCGB1D2	O95969	90 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	HOXB7	P09629	217 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	GOLGA6D	P0CG33	693 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	CREB1	P16220	341 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	SFPQ	P23246	707 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	ATP5F1	P24539	256 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	IL6ST	P40189	918 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	PTDSS1	P48651	473 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	CPT1A	P50416	773 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	PGD	P52209	483 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	RIPK4	P57078	832 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	PSG6	Q00889	435 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	LMAN2	Q12907	356 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	SLC29A2	Q14542	456 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	TWIST1	Q15672	202 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	CCDC96	Q2M329	555 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF750	Q32MQ0	723 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	KSR2	Q6VAB6	950 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	FTSJ3	Q8IY81	847 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	LINC01465	Q8N7H1	131 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	OSR1	Q8TAX0	266 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF398	Q8TD17	642 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.05	□□□□□ -1.76	4e-6	■□□□□ 9.9
CDC27-213	ENST00000571643	TTC14	Q96N46	770 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	EFHD1	Q9BUP0	239 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	STK31	Q9BXU1	1019 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	PPCS	Q9HAB8	311 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	AS3MT	Q9HBK9	375 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	CHST12	Q9NRB3	414 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	ASIC5	Q9NY37	505 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	GOLGA6A	Q9NYA3	693 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	KLHL13	Q9P2N7	655 aa		4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-213	ENST00000571643	IL16	Q14005	1332 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643		H3BNC9	293 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CHL1	O00533	1208 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	IKBKB	O14920	756 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	KCNAB3	O43448	404 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	DHX16	O60231	1041 aa	Known RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	HRG	P04196	525 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	IFIT2	P09913	472 aa	Known RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	TMEM191B	P0C7N4	346 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CYP19A1	P11511	503 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	TPH1	P17752	444 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	RFC4	P35249	363 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CRKL	P46109	303 aa	Known RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	DIO1	P49895	249 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	POLG	P54098	1239 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	ITPK1	Q13572	414 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CLCA4	Q14CN2	919 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	PTCHD3	Q3KNS1	767 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	ARHGAP29	Q52LW3	1261 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	LCE1A	Q5T7P2	110 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	RNF220	Q5VTB9	566 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	SWSAP1	Q6NVH7	229 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	DARS2	Q6PI48	645 aa	Known RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	ZDHHC24	Q6UX98	284 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	DCDC5	Q6ZRR9	648 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	KRT77	Q7Z794	578 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	SKAP1	Q86WV1	359 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	COL23A1	Q86Y22	540 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CPXCR1	Q8N123	301 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	TTC8	Q8TAM2	541 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	VPS50	Q96JG6	964 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	ZNF287	Q9HBT7	754 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CPNE7	Q9UBL6	633 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	MGAT4C	Q9UBM8	478 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	STEAP1	Q9UHE8	339 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	POLG2	Q9UHN1	485 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	GTF2A1L	Q9UNN4	478 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	RABGAP1	Q9Y3P9	1069 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CACNA1I	Q9P0X4	2223 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	KCP	Q6ZWJ8	1503 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	TJP1	Q07157	1748 aa		4.04	□□□□□ -1.76
CDC27-213	ENST00000571643	CACNA1F	O60840	1977 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	MYH14	Q7Z406	1995 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	TUBGCP6	Q96RT7	1819 aa		4.03	□□□□□ -1.76

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