RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 RNASE9P60153 205 aaKnown RBP22.34■■□□□ 1.17
UBFD1-210ENST00000571064 FAM193AP78312 1265 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 SEMA3BQ13214 749 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 PLEKHA7Q6IQ23 1121 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 C19orf48Q6RUI8 117 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 RAD9BQ6WBX8 426 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 RSRC2Q7L4I2 434 aaKnown RBP22.34■■□□□ 1.17
UBFD1-210ENST00000571064 TMTC1Q8IUR5 882 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 SYT12Q8IV01 421 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 CHCHD4Q8N4Q1 142 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 DQX1Q8TE96 717 aaKnown RBP22.34■■□□□ 1.17
UBFD1-210ENST00000571064 RNF139Q8WU17 664 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 CDK5RAP1Q96SZ6 601 aaKnown RBP22.34■■□□□ 1.17
UBFD1-210ENST00000571064 BAG1Q99933 345 aaPredicted RBP22.34■■□□□ 1.17
UBFD1-210ENST00000571064 PACSIN1Q9BY11 444 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 NACA2Q9H009 215 aa22.34■■□□□ 1.17
UBFD1-210ENST00000571064 MBD1Q9UIS9 605 aaPredicted RBP22.34■■□□□ 1.17
UBFD1-210ENST00000571064 GON4LQ3T8J9 2241 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 LEFTY2O00292 366 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 LCA5LO95447 670 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 CAPNS1P04632 268 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 TCF3P15923 654 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 GALCP54803 685 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 GAB4Q2WGN9 574 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 DCAF6Q58WW2 860 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 OTUD1Q5VV17 481 aaPredicted RBP22.33■■□□□ 1.17
UBFD1-210ENST00000571064 TADA2BQ86TJ2 420 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 TAC4Q86UU9 113 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 PROSER1Q86XN7 944 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 MIB1Q86YT6 1006 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 SFTPA1Q8IWL2 248 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 EMC1Q8N766 993 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 ZNF653Q96CK0 615 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 PDLIM2Q96JY6 352 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 THAP2Q9H0W7 228 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 OLA1Q9NTK5 396 aaKnown RBP22.33■■□□□ 1.17
UBFD1-210ENST00000571064 MARCH2Q9P0N8 246 aa22.33■■□□□ 1.17
UBFD1-210ENST00000571064 CNOT8Q9UFF9 292 aaKnown RBP22.33■■□□□ 1.17
UBFD1-210ENST00000571064 TNRC6BQ9UPQ9 1833 aaKnown RBP22.32■■□□□ 1.16
UBFD1-210ENST00000571064 ADAMTS20P59510 1910 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 SIGLEC16A6NMB1 481 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 GOLGA6L6A8MZA4 724 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 CAPN9O14815 690 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 MSI1O43347 362 aaKnown RBP22.32■■□□□ 1.16
UBFD1-210ENST00000571064 IGLV3-25P01717 112 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 TFE3P19532 575 aaPredicted RBP22.32■■□□□ 1.16
UBFD1-210ENST00000571064 ABCB4P21439 1286 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 RFC1P35251 1148 aaPredicted RBP22.32■■□□□ 1.16
UBFD1-210ENST00000571064 MAMLD1Q13495 774 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 EIF4EBP2Q13542 120 aaPredicted RBP22.32■■□□□ 1.16
UBFD1-210ENST00000571064 DNAJC24Q6P3W2 148 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 SLC23A3Q6PIS1 610 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 ARCQ7LC44 396 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 CCDC170Q8IYT3 715 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 ALLCQ8N6M5 410 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 ADAM32Q8TC27 787 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 ARHGEF26Q96DR7 871 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 TRIM62Q9BVG3 475 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 SELENOOQ9BVL4 669 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.32■■□□□ 1.16
UBFD1-210ENST00000571064 CALCOCO1Q9P1Z2 691 aa22.32■■□□□ 1.16
UBFD1-210ENST00000571064 PI4KAP42356 2102 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 SLC12A8A0AV02 714 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 C2CD4BA6NLJ0 364 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 GREM1O60565 184 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 ALDH1A2O94788 518 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 NFATC1O95644 943 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 CFIP05156 583 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 KRT3P12035 628 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 NOS2P35228 1153 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 MATKP42679 507 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 RPL7AP62424 266 aaKnown RBP22.31■■□□□ 1.16
UBFD1-210ENST00000571064 SOWAHCQ53LP3 525 aaPredicted RBP22.31■■□□□ 1.16
UBFD1-210ENST00000571064 TXNDC5Q8NBS9 432 aaKnown RBP22.31■■□□□ 1.16
UBFD1-210ENST00000571064 RXFP2Q8WXD0 754 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 NT5C3BQ969T7 300 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 SPACA7Q96KW9 195 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 NPY6RQ99463 290 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 GTPBP2Q9BX10 602 aaKnown RBP22.31■■□□□ 1.16
UBFD1-210ENST00000571064 CFAP97Q9P2B7 532 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 MYO1AQ9UBC5 1043 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 GPSM3Q9Y4H4 160 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 EPN1Q9Y6I3 576 aaPredicted RBP22.31■■□□□ 1.16
UBFD1-210ENST00000571064 FREM2Q5SZK8 3169 aa22.31■■□□□ 1.16
UBFD1-210ENST00000571064 FAM221BA6H8Z2 402 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 ANKRD62A6NC57 917 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 UPK3BL1B0FP48 263 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 UPK3BL2E5RIL1 263 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 SGK1O00141 431 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 SCAMP3O14828 347 aaKnown RBP22.3■■□□□ 1.16
UBFD1-210ENST00000571064 KLF8O95600 359 aaPredicted RBP22.3■■□□□ 1.16
UBFD1-210ENST00000571064 TRUB2O95900 331 aaKnown RBP22.3■■□□□ 1.16
UBFD1-210ENST00000571064 HMBSP08397 361 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 MYBL1P10243 752 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 IRF1P10914 325 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 ITPKAP23677 461 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 MRPS21P82921 87 aaKnown RBP22.3■■□□□ 1.16
UBFD1-210ENST00000571064 OGDHQ02218 1023 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 MESP2Q0VG99 397 aa22.3■■□□□ 1.16
UBFD1-210ENST00000571064 LYSMD4Q5XG99 296 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms