RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GJB6O95452 261 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 UNGP13051 313 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-205ENST00000571028 CD59P13987 128 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 HNRNPLP14866 589 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SLC6A3Q01959 620 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 ZNF33AQ06730 810 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 C19orf57Q0VDD7 668 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SNX30Q5VWJ9 437 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 OLFML1Q6UWY5 402 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 TOGARAM2Q6ZUX3 1019 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
CCDC40-205ENST00000571028 TADA2BQ86TJ2 420 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 NAXDQ8IW45 347 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 RGL4Q8IZJ4 473 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 DEFB106AQ8N104 65 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SCML4Q8N228 414 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 ADAM32Q8TC27 787 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 BBC3Q96PG8 261 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-205ENST00000571028 DNAJC7Q99615 494 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 CHP1Q99653 195 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SYT11Q9BT88 431 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 SCUBE2Q9NQ36 999 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 ARHGEF4Q9NR80 690 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 ABCC13Q9NSE7 274 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 DNAAF2Q9NVR5 837 aaKnown RBP13.84□□□□□ -0.19
CCDC40-205ENST00000571028 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 COX16Q9P0S2 106 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 DNMT3LQ9UJW3 386 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 STRIP2Q9ULQ0 834 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 ABCA7Q8IZY2 2146 aa13.84□□□□□ -0.19
CCDC40-205ENST00000571028 LAMA5O15230 3695 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 MYO16Q9Y6X6 1858 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 SLC9A3R1O14745 358 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 MSI1O43347 362 aaKnown RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 ADH1CP00326 375 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 FTLP02792 175 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 CYP17A1P05093 508 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 TCF3P15923 654 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 MMP8P22894 467 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 TUBP50607 506 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 YWHAZP63104 245 aaKnown RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 SLC7A9P82251 487 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 ZXDBP98169 803 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 CENPCQ03188 943 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 KDSRQ06136 332 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 PLEKHG6Q3KR16 790 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 DCAF6Q58WW2 860 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 EFHC1Q5JVL4 640 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 SYPL2Q5VXT5 272 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 WDR59Q6PJI9 974 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 WBP2Q969T9 261 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 METTL5Q9NRN9 209 aaKnown RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 OLA1Q9NTK5 396 aaKnown RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 MYO1AQ9UBC5 1043 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 SUSD2Q9UGT4 822 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 IGSF10Q6WRI0 2623 aa13.83□□□□□ -0.2
CCDC40-205ENST00000571028 SMG1Q96Q15 3661 aaKnown RBP13.83□□□□□ -0.2
CCDC40-205ENST00000571028 ASCC3Q8N3C0 2202 aaKnown RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 A0A087X0T9 212 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 ANTXRLA6NF34 631 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 GOLGA6L6A8MZA4 724 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 AKR1B10O60218 316 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 OLFM2O95897 454 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 CALB1P05937 261 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 FYNP06241 537 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 FAM228BP0C875 321 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 GNSP15586 552 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 PFKLP17858 780 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 ABCB4P21439 1286 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 CDC25BP30305 580 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 HNRNPH3P31942 346 aaKnown RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 EIF2DP41214 584 aaKnown RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 GRIA2P42262 883 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 GABRB2P47870 512 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 CCDC122Q5T0U0 273 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 SYCP2LQ5T4T6 812 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 NUDT18Q6ZVK8 323 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 PHF13Q86YI8 300 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 MCOLN2Q8IZK6 566 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 EMC1Q8N766 993 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 TC2NQ8N9U0 490 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 CCDC42Q96M95 316 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 HSPA12BQ96MM6 686 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 SELENOOQ9BVL4 669 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 KLF16Q9BXK1 252 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 ZDHHC4Q9NPG8 344 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 SPTLC3Q9NUV7 552 aa13.82□□□□□ -0.2
CCDC40-205ENST00000571028 FLNBO75369 2602 aaKnown RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
CCDC40-205ENST00000571028 HSF2BPO75031 334 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 RTN2O75298 545 aa13.81□□□□□ -0.2
CCDC40-205ENST00000571028 NDUFS2O75306 463 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms