RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SNX10Q9Y5X0 201 aa13.87□□□□□ -0.19
RPAIN-207ENST00000570883 TYW5A2RUC4 315 aaKnown RBP13.86□□□□□ -0.19
RPAIN-207ENST00000570883 C2CD4BA6NLJ0 364 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 ALDH1A2O94788 518 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 CCDC172P0C7W6 258 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 NDUFV2P19404 249 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 BCKDHBP21953 392 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 PRKCIP41743 596 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
RPAIN-207ENST00000570883 CDH18Q13634 790 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 AUHQ13825 339 aaKnown RBP13.86□□□□□ -0.19
RPAIN-207ENST00000570883 PTPRNQ16849 979 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 BRMS1LQ5PSV4 323 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 MBLAC2Q68D91 279 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 FBXL22Q6P050 247 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 LRSAM1Q6UWE0 723 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 ZNF571Q7Z3V5 609 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-207ENST00000570883 C14orf80Q86SX3 495 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 ZNF683Q8IZ20 524 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 UCMAQ8WVF2 138 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 RXFP2Q8WXD0 754 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 RLN3Q8WXF3 142 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 EDEM3Q9BZQ6 932 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 TKTL2Q9H0I9 626 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 SLC6A17Q9H1V8 727 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 TSPY26PQ9H489 355 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 HAUS4Q9H6D7 363 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 NCDNQ9UBB6 729 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 SLC12A6Q9UHW9 1150 aa13.86□□□□□ -0.19
RPAIN-207ENST00000570883 NPC1O15118 1278 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 ENDOD1O94919 500 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 CALB1P05937 261 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 TGM1P22735 817 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 RDXP35241 583 aaKnown RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 P2RY2P41231 377 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 ATP11AP98196 1134 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 C15orf59Q2T9L4 293 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 PLK5Q496M5 336 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 CCDC14Q49A88 953 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 SDE2Q6IQ49 451 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 CXorf57Q6NSI4 855 aaKnown RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 FAM131BQ86XD5 332 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 DNAAF5Q86Y56 855 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 CCAR2Q8N163 923 aaKnown RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 FRMD1Q8N878 549 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 ZC3H10Q96K80 434 aaKnown RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 XPO4Q9C0E2 1151 aaKnown RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 DUSP15Q9H1R2 295 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 TMEM245Q9H330 911 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 WDCPQ9H6R7 721 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 PARD6AQ9NPB6 346 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 BCCIPQ9P287 314 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPAIN-207ENST00000570883 RAB23Q9ULC3 237 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 VANGL2Q9ULK5 521 aa13.85□□□□□ -0.19
RPAIN-207ENST00000570883 A0A1B0GVM2 712 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 A0A1W2PQJ5 194 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 TCAF2A6NFQ2 919 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 DDX3XO00571 662 aaKnown RBP eCLIP13.84□□□□□ -0.192e-11■■■■■ 31.8
RPAIN-207ENST00000570883 TIMM44O43615 452 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 F9P00740 461 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 GYPCP04921 128 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 DLDP09622 509 aaKnown RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 KRT3P12035 628 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 SKILP12757 684 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 HLA-EP13747 358 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 PDGFRAP16234 1089 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 TNFAIP3P21580 790 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 RRM1P23921 792 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 CSKP41240 450 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 PTPN9P43378 593 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 CDO1Q16878 200 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 MAP7D1Q3KQU3 841 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 C5orf22Q49AR2 442 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 FNDC3BQ53EP0 1204 aaKnown RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 USP39Q53GS9 565 aaKnown RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 PITRM1Q5JRX3 1037 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 RABGAP1LQ5R372 815 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 TTC39BQ5VTQ0 682 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 HGSNATQ68CP4 663 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 ACAD10Q6JQN1 1059 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 SERPINA13PQ6UXR4 307 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 SND1Q7KZF4 910 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 MCOLN2Q8IZK6 566 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 ZNF366Q8N895 744 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 ZNF557Q8N988 423 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 OR52K2Q8NGK3 314 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 TTC17Q96AE7 1141 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 MYO19Q96H55 970 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 MRGPRX1Q96LB2 322 aa13.84□□□□□ -0.19
RPAIN-207ENST00000570883 RPRD1AQ96P16 312 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 MKRN2Q9H000 416 aaKnown RBP13.84□□□□□ -0.19
RPAIN-207ENST00000570883 SIK2Q9H0K1 926 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms