RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PDSS2Q86YH6 399 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 DNAJC5GQ8N7S2 189 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 NLGN4YQ8NFZ3 816 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 STON2Q8WXE9 905 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 CCDC47Q96A33 483 aaKnown RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 SPSB4Q96A44 273 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 EPSTI1Q96J88 318 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 GSDMAQ96QA5 445 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PARK7Q99497 189 aaKnown RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 RIT2Q99578 217 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PRPF18Q99633 342 aaKnown RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 SPATC1LQ9H0A9 340 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 VPS45Q9NRW7 570 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 TBC1D22BQ9NU19 505 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 TBC1D23Q9NUY8 699 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 ING3Q9NXR8 418 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 CYP39A1Q9NYL5 469 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 CLIC5Q9NZA1 410 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 IGSF9Q9P2J2 1179 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 ADD3Q9UEY8 706 aaKnown RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 IGLV3-22A0A075B6J6 115 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 CCL15-CCL14A0A0B4J2E2 113 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 MANSC4A6NHS7 340 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-222ENST00000570139 FAM86B1E9PN63 330 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 K7ENM7 598 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 KLHL18O94889 574 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 TNFRSF6BO95407 300 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 FAM86B2P0C5J1 330 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 RAP2AP10114 183 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 PFKLP17858 780 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 TPM4P67936 248 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 PPP2R5CQ13362 524 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 PGM5Q15124 567 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 TOMM20Q15388 145 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 IL17AQ16552 155 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 CCL15Q16663 113 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 TBC1D1Q86TI0 1168 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-222ENST00000570139 PLA2G4DQ86XP0 818 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 ANKRD35Q8N283 1001 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SLC15A4Q8N697 577 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 KYQ8NBH2 561 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 OR56A3Q8NH54 315 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SPATA20Q8TB22 786 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SMCR8Q8TEV9 937 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-222ENST00000570139 HAS1Q92839 578 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SMARCE1Q969G3 411 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 LENG9Q96B70 501 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 DHX58Q96C10 678 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SLC7A6OSQ96CW6 309 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-222ENST00000570139 ERP27Q96DN0 273 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 KIRREL1Q96J84 757 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 MXRA8Q9BRK3 442 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 TEKT3Q9BXF9 490 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SIK2Q9H0K1 926 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 SEPSECSQ9HD40 501 aaKnown RBP7.63□□□□□ -1.19
CNOT1-222ENST00000570139 ALG13Q9NP73 1137 aaKnown RBP7.63□□□□□ -1.19
CNOT1-222ENST00000570139 PXMP2Q9NR77 195 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 BLOC1S4Q9NUP1 217 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 LRRC37A2A6NM11 1700 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 UTRNP46939 3433 aa7.63□□□□□ -1.19
CNOT1-222ENST00000570139 PASKQ96RG2 1323 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 A0A0B4J269 797 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 A6NLC8 198 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SMTNL1A8MU46 457 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 B4E171 279 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 MSH4O15457 936 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 ASNA1O43681 348 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 EDIL3O43854 480 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 DKC1O60832 514 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT1-222ENST00000570139 UNC5CO95185 931 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 ITGB2P05107 769 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 JUNP05412 331 aaKnown RBP7.62□□□□□ -1.19
CNOT1-222ENST00000570139 GRPP07492 148 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 EGR1P18146 543 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 RPA1P27694 616 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 CST5P28325 142 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SFNP31947 248 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 TSPAN7P41732 249 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SLC11A2P49281 568 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 HUNKP57058 714 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SREBF2Q12772 1141 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 TOP3AQ13472 1001 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SMAD4Q13485 552 aaKnown RBP7.62□□□□□ -1.19
CNOT1-222ENST00000570139 TRPC3Q13507 836 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 KCNB1Q14721 858 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 MAPKAPK3Q16644 382 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 DCAF12L1Q5VU92 463 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 LRCH2Q5VUJ6 765 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 AFMIDQ63HM1 303 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 KCNV1Q6PIU1 500 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 DLK2Q6UY11 383 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SLC30A10Q6XR72 485 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SEM1Q6ZVN7 128 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 MOB2Q70IA6 237 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 TP53INP2Q8IXH6 220 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 ABRAQ8N0Z2 381 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 MLKLQ8NB16 471 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 SIMC1Q8NDZ2 872 aa7.62□□□□□ -1.19
CNOT1-222ENST00000570139 GPRC5AQ8NFJ5 357 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms