RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 DNAJB7Q7Z6W7 309 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 MYRFLQ96LU7 910 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 CEP295NLQ96MC4 621 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TCF25Q9BQ70 676 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 WDR83Q9BRX9 315 aaKnown RBP11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 TRANK1O15050 2925 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 GCATO75600 419 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 LRIG3Q6UXM1 1119 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 ETNK1Q9HBU6 452 aa11.25□□□□□ -0.61
PDXDC1-216ENST00000569715 GOLGA6L7A0A1B0GV03 622 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 C5orf60A6NFR6 353 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 PPP1R12AO14974 1030 aaPredicted RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 SLC2A3P11169 496 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ACTN2P35609 894 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 BMPR1AP36894 532 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF135P52742 658 aaPredicted RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 GALNT2Q10471 571 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 TAF12Q16514 161 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 SPDYCQ5MJ68 293 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ANKRD20A2Q5SQ80 823 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ANKRD20A1Q5TYW2 823 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ANKRD20A3Q5VUR7 823 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 PLPP4Q5VZY2 271 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 RAP1GAP2Q684P5 730 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 NADSYN1Q6IA69 706 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 BZW1Q7L1Q6 419 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ARHGAP12Q8IWW6 846 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 CCDC13Q8IYE1 715 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 NRG2O14511 850 aaPredicted RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 CNTN5O94779 1100 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 NUDT17P0C025 328 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 AUHQ13825 339 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 VEPH1Q14D04 833 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 SNX30Q5VWJ9 437 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 KCTD16Q68DU8 428 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 PCGF5Q86SE9 256 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 HOOK3Q86VS8 718 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 CIR1Q86X95 450 aaPredicted RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 PDZD8Q8NEN9 1154 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 IGSF8Q969P0 613 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 TRMT2BQ96GJ1 504 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 RNF38Q9H0F5 515 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ENTPD7Q9NQZ7 604 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 A0A0A0MRY4 1105 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ATP5C1P36542 298 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 MAGEA4P43358 317 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 HIF1AQ16665 826 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ALFQ53S48 1182 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 HECTD3Q5T447 861 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 TRMT10CQ7L0Y3 403 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 TFAP2DQ7Z6R9 452 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 ZNF567Q8N184 647 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 SH2D3CQ8N5H7 860 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 OVCA2Q8WZ82 227 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 WBP2Q969T9 261 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 PSMG2Q969U7 264 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 BTN2A3PQ96KV6 586 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 SPATA13Q96N96 652 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 KLHL5Q96PQ7 755 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 NACA2Q9H009 215 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 VPS18Q9P253 973 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 DENND4CQ5VZ89 1909 aa11.24□□□□□ -0.61
PDXDC1-216ENST00000569715 DFFAO00273 331 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 AVILO75366 819 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 TTC4O95801 387 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 SERPINB6P35237 376 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 NRG1Q02297 640 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 FBXL22Q6P050 247 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 ARHGEF18Q6ZSZ5 1173 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 ZBED8Q8IZ13 594 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 PHOSPHO2Q8TCD6 241 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 C1orf74Q96LT6 269 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 PRMT1Q99873 361 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 GKN1Q9NS71 199 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 PDE4DIPQ5VU43 2346 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 SMIM23A6NLE4 172 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 APRTP07741 180 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 EPHB3P54753 998 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 RING1Q06587 406 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 ZBTB17Q13105 803 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 LILRA6Q6PI73 481 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 CAPN12Q6ZSI9 719 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 PDZD4Q76G19 769 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 NLRP14Q86W24 1093 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 GPR65Q8IYL9 337 aa11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 AGGF1Q8N302 714 aaeCLIP11.23□□□□□ -0.617e-7■□□□□ 9.1
PDXDC1-216ENST00000569715 RTL3Q8N8U3 475 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-216ENST00000569715 POF1BQ8WVV4 589 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms