RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, human

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-225	ENST00000569709	SMO	Q99835	787 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	GABRG3	Q99928	467 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	KLF16	Q9BXK1	252 aa	Predicted RBP	11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	SDCBP2	Q9H190	292 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	SLC6A17	Q9H1V8	727 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	FBXO44	Q9H4M3	255 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	TLR8	Q9NR97	1041 aa	Known RBP	11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	CACNA2D2	Q9NY47	1150 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	WDR35	Q9P2L0	1181 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	SUSD2	Q9UGT4	822 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	LSM7	Q9UK45	103 aa	Known RBP	11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	PLXNB3	Q9ULL4	1909 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	SAR1B	Q9Y6B6	198 aa		11.22	□□□□□ -0.61
RNPS1-225	ENST00000569709	TAF4	O00268	1085 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	GJB3	O75712	270 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	GNS	P15586	552 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	DGKG	P49619	791 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	MAP3K7CL	P57077	242 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	GRIK2	Q13002	908 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	ORC1	Q13415	861 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	NCOA4	Q13772	614 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	TRIP6	Q15654	476 aa	Known RBP	11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	PAPD7	Q5XG87	772 aa	Known RBP	11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	KRT39	Q6A163	491 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	PROSER1	Q86XN7	944 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	NAXD	Q8IW45	347 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	ARHGEF19	Q8IW93	802 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	RNF10	Q8N5U6	811 aa	Known RBP	11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	SLC2A14	Q8TDB8	520 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	FOXJ1	Q92949	421 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	CAPZA3	Q96KX2	299 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	ARID3A	Q99856	593 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	PACSIN1	Q9BY11	444 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	TMEM8A	Q9HCN3	771 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	CYLD	Q9NQC7	956 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.21	□□□□□ -0.61	2e-6	■■■■■ 58.7
RNPS1-225	ENST00000569709	SEPT11	Q9NVA2	429 aa	Known RBP	11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	MARK1	Q9P0L2	795 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	HMGXB4	Q9UGU5	601 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	JRKL	Q9Y4A0	524 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	PCDHB9	Q9Y5E1	797 aa		11.21	□□□□□ -0.61
RNPS1-225	ENST00000569709	APC2	O95996	2303 aa		11.21	□□□□□ -0.62
RNPS1-225	ENST00000569709	GCN1	Q92616	2671 aa	Known RBP	11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	MEI4	A8MW99	385 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	WASH3P	C4AMC7	463 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	GFRA2	O00451	464 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	CYP26A1	O43174	497 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	RRP9	O43818	475 aa	Known RBP	11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	VNN1	O95497	513 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	CAPNS1	P04632	268 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	FTH1P19	P0C7X4	201 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	P4HA1	P13674	534 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	TNFAIP3	P21580	790 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	MAOB	P27338	520 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	CD6	P30203	668 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	ATP5C1	P36542	298 aa	Known RBP	11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	USP8	P40818	1118 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	NDST1	P52848	882 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	AP3M2	P53677	418 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	SCAP	Q12770	1279 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	WDR45B	Q5MNZ6	344 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	ALKBH5	Q6P6C2	394 aa	Known RBP	11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	FBXO38	Q6PIJ6	1188 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	RSRC2	Q7L4I2	434 aa	Known RBP	11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	GPRIN1	Q7Z2K8	1008 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	PNPLA1	Q8N8W4	532 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	LMO3	Q8TAP4	145 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	PARD3B	Q8TEW8	1205 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	NT5C1B	Q96P26	610 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	CSNK1G1	Q9HCP0	422 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	FAM49B	Q9NUQ9	324 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	OSER1	Q9NX31	292 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	PLK2	Q9NYY3	685 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	NAGPA	Q9UK23	515 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	HYOU1	Q9Y4L1	999 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	KNL1	Q8NG31	2342 aa		11.2	□□□□□ -0.62
RNPS1-225	ENST00000569709	CKAP5	Q14008	2032 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	DDX3X	O00571	662 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	MDM4	O15151	490 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	PMM2	O15305	246 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	SRGAP2	O75044	1071 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	C4BPA	P04003	597 aa	Known RBP	11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	H2AFZ	P0C0S5	128 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	CISD3	P0C7P0	127 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	FAM200B	P0CF97	657 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	ADORA2B	P29275	332 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	GTF2H1	P32780	548 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	MFAP3	P55082	362 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	CLDN10	P78369	228 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	ENPEP	Q07075	957 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	STARD3	Q14849	445 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	IFI16	Q16666	785 aa	Known RBP	11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	FUT11	Q495W5	492 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	H2AFV	Q71UI9	128 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	CRYBG2	Q8N1P7	616 aa		11.19	□□□□□ -0.62
RNPS1-225	ENST00000569709	PPM1K	Q8N3J5	372 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms