RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 APOLD1Q96LR9 279 aa9.47□□□□□ -0.89
TCF4-243ENST00000569357 RSPH9Q9H1X1 276 aaPredicted RBP9.47□□□□□ -0.89
TCF4-243ENST00000569357 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
TCF4-243ENST00000569357 FAM49BQ9NUQ9 324 aa9.47□□□□□ -0.89
TCF4-243ENST00000569357 UCKL1Q9NWZ5 548 aa9.47□□□□□ -0.89
TCF4-243ENST00000569357 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
TCF4-243ENST00000569357 CKAP5Q14008 2032 aa9.46□□□□□ -0.89
TCF4-243ENST00000569357 COL12A1Q99715 3063 aa9.46□□□□□ -0.89
TCF4-243ENST00000569357 AHCTF1Q8WYP5 2266 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 A0A1W2PNU3 283 aaPredicted RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 SLC12A8A0AV02 714 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 PHACTR2O75167 634 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 SIN3BO75182 1162 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 ITGB2P05107 769 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 DLDP09622 509 aaKnown RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 ALPPL2P10696 532 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 PABPC1P11940 636 aaKnown RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 CKMT1AP12532 417 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 POLR2EP19388 210 aaKnown RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 TGM2P21980 687 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 DGKAP23743 735 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 SLC8A1P32418 973 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 PSMD8P48556 350 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 DUSP3P51452 185 aaPredicted RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 MYL6P60660 151 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 ST8SIA6P61647 398 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 PPP2CBP62714 309 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 PPP2CAP67775 309 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 SKOR1P84550 965 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 SRSF6Q13247 344 aaKnown RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 TGIF1Q15583 401 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 CRTC1Q6UUV9 634 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
TCF4-243ENST00000569357 ADIPOR2Q86V24 386 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 AHI1Q8N157 1196 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 CPXM2Q8N436 756 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 FAM26EQ8N5C1 309 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 IFI44Q8TCB0 444 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 ELMO3Q96BJ8 720 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 PSMG3-AS1Q96PY0 264 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 STRA6Q9BX79 667 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 SLC25A18Q9H1K4 315 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 EPN3Q9H201 632 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 EVA1BQ9NVM1 165 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 GGA2Q9UJY4 613 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 ATXN7L1Q9ULK2 861 aaPredicted RBP9.46□□□□□ -0.9
TCF4-243ENST00000569357 CA5BQ9Y2D0 317 aa9.46□□□□□ -0.9
TCF4-243ENST00000569357 TP53BP1Q12888 1972 aaPredicted RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 CPED1A4D0V7 1026 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 CDRT15L2A8MXV6 281 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 GP1BAP07359 652 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 FAM200BP0CF97 657 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 IDEP14735 1019 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 HOXD9P28356 352 aaPredicted RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 CASP5P51878 434 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 ADPRHP54922 357 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 HMGN5P82970 282 aaKnown RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 RILPL1Q5EBL4 403 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 IGF2-ASQ6U949 168 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 RSRC2Q7L4I2 434 aaKnown RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 JAMLQ86YT9 394 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 ZC3H3Q8IXZ2 948 aaKnown RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 WDR36Q8NI36 951 aaKnown RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 TMA16Q96EY4 203 aaKnown RBP9.45□□□□□ -0.9
TCF4-243ENST00000569357 KLHDC7BQ96G42 594 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 AK8Q96MA6 479 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 MYOCQ99972 504 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 SEMA3CQ99985 751 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 SYNDIG1Q9H7V2 258 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 CAAP1Q9H8G2 361 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 MARCH2Q9P0N8 246 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 FZD4Q9ULV1 537 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 PCDHGA8Q9Y5G5 932 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 ENTPD2Q9Y5L3 495 aa9.45□□□□□ -0.9
TCF4-243ENST00000569357 KIAA0391O15091 583 aaKnown RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 SLC26A4O43511 780 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 GOT1P17174 413 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 GAP43P17677 238 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 CYP4F2P78329 520 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 BIRC3Q13489 604 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 NCAPHQ15003 741 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 TBR1Q16650 682 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 CDKN3Q16667 212 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 ZNF667Q5HYK9 610 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 ARL6IP4Q66PJ3 421 aaKnown RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 CLEC20AQ6ZU45 233 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 SCD5Q86SK9 330 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 C14orf80Q86SX3 495 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 C12orf29Q8N999 325 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 ZSCAN1Q8NBB4 408 aa9.44□□□□□ -0.9
TCF4-243ENST00000569357 SYAP1Q96A49 352 aaPredicted RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 LIN37Q96GY3 246 aaPredicted RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 PRR11Q96HE9 360 aaPredicted RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 CDK5RAP1Q96SZ6 601 aaKnown RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 LLPHQ9BRT6 129 aaKnown RBP9.44□□□□□ -0.9
TCF4-243ENST00000569357 FGFBP2Q9BYJ0 223 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms