RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 STILQ15468 1287 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 CST6Q15828 149 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 PKDCCQ504Y2 493 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 KCNT1Q5JUK3 1230 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 LAYNQ6UX15 382 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 LRRC69Q6ZNQ3 347 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 HSCBQ8IWL3 235 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 LSM14AQ8ND56 463 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 NDRG1Q92597 394 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 MYO19Q96H55 970 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 SPATA32Q96LK8 384 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 OMDQ99983 421 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 NRSN2Q9GZP1 204 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 ERVMER34-1Q9H9K5 563 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 TMEM131Q92545 1883 aa16.35■□□□□ 0.21
HERPUD1-215ENST00000568676 FAM47DPA6NHR8 397 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 O00370 1275 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 SLC16A3O15427 465 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 RRP8O43159 456 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 MSI1O43347 362 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 SIN3BO75182 1162 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 FBXO21O94952 628 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 PAEPP09466 180 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 NUDT1P36639 197 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 SGSHP51688 502 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 TBX4P57082 545 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 KRT85P78386 507 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 CCDC157Q569K6 752 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 FAM133BQ5BKY9 247 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 NCEH1Q6PIU2 408 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 SND1Q7KZF4 910 aaKnown RBP eCLIP16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 CACTIN-AS1Q8N1I8 211 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 WFDC5Q8TCV5 224 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 SAP25Q8TEE9 199 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 CNDP2Q96KP4 475 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 LMLNQ96KR4 655 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 SLC6A18Q96N87 628 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 AASDHPPTQ9NRN7 309 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 ITIH6Q6UXX5 1313 aa16.34■□□□□ 0.21
HERPUD1-215ENST00000568676 NUMA1Q14980 2115 aa16.33■□□□□ 0.21
HERPUD1-215ENST00000568676 EDDM13A0A1B0GTR0 161 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 C10orf142B7Z368 130 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 PLK4O00444 970 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 MAGEC1O60732 1142 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 RNASEH2AO75792 299 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 ADH1BP00325 375 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 LTFP02788 710 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 LCP1P13796 627 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 C5AR1P21730 350 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC6A4P31645 630 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 CSKP41240 450 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 NDUFA8P51970 172 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 IL9RQ01113 521 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 C19orf57Q0VDD7 668 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 CDH18Q13634 790 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 KRBA2Q6ZNG9 492 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 MARCH9Q86YJ5 346 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 UBA3Q8TBC4 463 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC35F5Q8WV83 523 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 BAP1Q92560 729 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 MRGPRX3Q96LB0 322 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 HSFY1Q96LI6 401 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 SERPINB11Q96P15 392 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 TRIM62Q9BVG3 475 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 NEUROG2Q9H2A3 272 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 TLR6Q9Y2C9 796 aa16.33■□□□□ 0.2
HERPUD1-215ENST00000568676 A0A1W2PP55 124 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 MID1O15344 667 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 SART1O43290 800 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 GOT1P17174 413 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 EPHA8P29322 1005 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC8A1P32418 973 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 NNMTP40261 264 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 EIF2S3P41091 472 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 RXRGP48443 463 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 ACADVLP49748 655 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 FKBP3Q00688 224 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 OVGP1Q12889 678 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 RTP5Q14D33 572 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 CNGA2Q16280 664 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 CBWD6Q4V339 395 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 CBWD3Q5JTY5 395 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 CBWD5Q5RIA9 395 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 C9orf64Q5T6V5 341 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 RNF219Q5W0B1 726 aaPredicted RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 GATAD2AQ86YP4 633 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 DHX40Q8IX18 779 aaKnown RBP16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 KNL1Q8NG31 2342 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 TSG101Q99816 390 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 KDM4CQ9H3R0 1056 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 RMND1Q9NWS8 449 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 STIM2Q9P246 746 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms