RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ARSEP51690 589 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 PON2Q15165 354 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 DPYSL2Q16555 572 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 ATP13A4Q4VNC1 1196 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 BOLA3Q53S33 107 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 RABGAP1LQ5R372 815 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 TTC39BQ5VTQ0 682 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-222ENST00000568034 FAM3CQ92520 227 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 CD101Q93033 1021 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 CALR3Q96L12 384 aaKnown RBP18.56■□□□□ 0.56
COMMD4-222ENST00000568034 TSGA10Q9BZW7 698 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 DHX35Q9H5Z1 703 aaKnown RBP18.56■□□□□ 0.56
COMMD4-222ENST00000568034 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 DNAJC17Q9NVM6 304 aaKnown RBP18.56■□□□□ 0.56
COMMD4-222ENST00000568034 MPP6Q9NZW5 540 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 STIM2Q9P246 746 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 PPARGC1AQ9UBK2 798 aaKnown RBP18.56■□□□□ 0.56
COMMD4-222ENST00000568034 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 CAPN6Q9Y6Q1 641 aa18.56■□□□□ 0.56
COMMD4-222ENST00000568034 A0A1B0GVM2 712 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 TCAF2A6NFQ2 919 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 MAN2B1O00754 1011 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 SRGAP2O75044 1071 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 LUC7L3O95232 432 aaKnown RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 MOCS3O95396 460 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 PDGFBP01127 241 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 CHRM1P11229 460 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 TARSP26639 723 aaKnown RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 HLA-FP30511 346 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 HADHQ16836 314 aaKnown RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 TMEM196Q5HYL7 178 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 FSTL4Q6MZW2 842 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 ZNF852Q6ZMS4 543 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 CHST9Q7L1S5 443 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 NLRP14Q86W24 1093 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 SFTPA1Q8IWL2 248 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 CCAR2Q8N163 923 aaKnown RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 FAM71BQ8TC56 605 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 XPO6Q96QU8 1125 aaKnown RBP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 P2RY13Q9BPV8 354 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 TBC1D17Q9HA65 648 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 LTB4R2Q9NPC1 389 aa18.55■□□□□ 0.56
COMMD4-222ENST00000568034 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.55■□□□□ 0.56
COMMD4-222ENST00000568034 KANSL1LA0AUZ9 987 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 TMEM221A6NGB7 291 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 M0R296 226 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 KRT86O43790 486 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 SSR1P43307 286 aaKnown RBP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 AMPD2Q01433 879 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 KDSRQ06136 332 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 FZD5Q13467 585 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 FSCBQ5H9T9 825 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 LRRC38Q5VT99 294 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 CWF19L1Q69YN2 538 aaKnown RBP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 CXorf57Q6NSI4 855 aaKnown RBP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 C1orf228Q6PIY5 440 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 LRRC31Q6UY01 552 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 POLNQ7Z5Q5 900 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 RNF10Q8N5U6 811 aaKnown RBP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 OR52K2Q8NGK3 314 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 FIBINQ8TAL6 211 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 HSPH1Q92598 858 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 TBC1D31Q96DN5 1066 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 SHDQ96IW2 340 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 SLC2A11Q9BYW1 496 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 FOXQ1Q9C009 403 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 PCDH18Q9HCL0 1135 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 GUCA1BQ9UMX6 200 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 SLC27A6Q9Y2P4 619 aa18.54■□□□□ 0.56
COMMD4-222ENST00000568034 MTF2Q9Y483 593 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.54■□□□□ 0.56
COMMD4-222ENST00000568034 A0A0A0MRY4 1105 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 TYW5A2RUC4 315 aaKnown RBP18.53■□□□□ 0.56
COMMD4-222ENST00000568034 ANTXRLA6NF34 631 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 SPOPO43791 374 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 PALMO75781 387 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 CD48P09326 243 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 CD70P32970 193 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 GJC1P36383 396 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 DGKGP49619 791 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 NAP1L1P55209 391 aaKnown RBP18.53■□□□□ 0.56
COMMD4-222ENST00000568034 CDH4P55283 916 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 LMAN2Q12907 356 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 CCINQ13939 588 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 GEN1Q17RS7 908 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 GRAMD4Q6IC98 578 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 KIAA0907Q7Z7F0 614 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-222ENST00000568034 DAAM2Q86T65 1068 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 MFN1Q8IWA4 741 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 REXO1L1PQ8IX06 675 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 CARNMT1Q8N4J0 409 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 TERB1Q8NA31 727 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 TSC1Q92574 1164 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 PNKPQ96T60 521 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 EPAS1Q99814 870 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 ZYG11BQ9C0D3 744 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 LZTFL1Q9NQ48 299 aa18.53■□□□□ 0.56
COMMD4-222ENST00000568034 ARHGEF4Q9NR80 690 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms