RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PLXNB2O15031 1838 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 FOCADQ5VW36 1801 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 A0A0U1RQJ8 604 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 PRSS38A1L453 326 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 LCHNA4D1U4 455 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SRRM3A6NNA2 597 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 E9PMD0 336 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 GCOM1H8Y6P7 765 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 NEMP1O14524 444 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 ZNF263O14978 683 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SEC24DO94855 1032 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 NR3C1P04150 777 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 POLR2MP0CAP2 368 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 UCHL3P15374 230 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SCP2P22307 547 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 PSMC2P35998 433 aaKnown RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SLC16A2P36021 539 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 STAT1P42224 750 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 KIR2DL3P43628 341 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TNNT3P45378 269 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 MASP1P48740 699 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 LMAN1P49257 510 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 KLK7P49862 253 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SESN3P58005 492 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 POLR2FP61218 127 aaKnown RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 GFPT1Q06210 699 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 ENPEPQ07075 957 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 STRN3Q13033 797 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 IKQ13123 557 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 PPIGQ13427 754 aaKnown RBP eCLIP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 CUL1Q13616 776 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 GIT2Q14161 759 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 RPS6KA1Q15418 735 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 ZSCAN26Q16670 478 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TRIM60Q495X7 471 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TREML2Q5T2D2 321 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 USP17L6PQ6QN14 398 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 NIPA1Q7RTP0 329 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 KCNK18Q7Z418 384 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 GPR142Q7Z601 462 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 USP37Q86T82 979 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SPATS2Q86XZ4 545 aaKnown RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 MREGQ8N565 214 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 FAM76AQ8TAV0 307 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 AFAP1L1Q8TED9 768 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 ATRIPQ8WXE1 791 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TBC1D5Q92609 795 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TMEM176AQ96HP8 235 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 CAPZA3Q96KX2 299 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 NAP1L3Q99457 506 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 RIT2Q99578 217 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 MAF1Q9H063 256 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 EPC1Q9H2F5 836 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 PRDM12Q9H4Q4 367 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TMEM206Q9H813 350 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SLC28A3Q9HAS3 691 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 PARVGQ9HBI0 331 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 KCNG1Q9UIX4 513 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 ZHX1Q9UKY1 873 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 HPCAL4Q9UM19 191 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 TMX2Q9Y320 296 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 NOC2LQ9Y3T9 749 aaKnown RBP5.63□□□□□ -1.51
CAPN3-217ENST00000567817 PRKAB1Q9Y478 270 aa5.63□□□□□ -1.51
CAPN3-217ENST00000567817 GREB1LQ9C091 1923 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-217ENST00000567817 DNAH12Q6ZR08 3092 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 TRIM43BA6NCK2 446 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 SLC15A5A6NIM6 579 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 C19orf81C9J6K1 198 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 H3BQF6 201 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 MAPK13O15264 365 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 PMM2O15305 246 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 MSH4O15457 936 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 SEPT4O43236 478 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 BRINP1O60477 761 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 HSF2BPO75031 334 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 MED24O75448 989 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 NOL4O94818 638 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GCNT3O95395 438 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 MOCS3O95396 460 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 H2AFZP0C0S5 128 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GAAP10253 952 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 XPAP23025 273 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-217ENST00000567817 ACRV1P26436 265 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 ZNF131P52739 623 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GHRHRQ02643 423 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 RAPGEF1Q13905 1077 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 ACAP1Q15027 740 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 LRRC41Q15345 812 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 KIAA0753Q2KHM9 967 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 SPDYCQ5MJ68 293 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 KLHDC7AQ5VTJ3 777 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 H2AFVQ71UI9 128 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 INTS8Q75QN2 995 aaKnown RBP5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GAREM2Q75VX8 874 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 ANKRD33Q7Z3H0 272 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 CROCCP2Q86T23 111 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms