RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 TRIM62Q9BVG3 475 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 TAS2R1Q9NYW7 299 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 AAR2Q9Y312 384 aaKnown RBP12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
CSPG4P13-202ENST00000567704 SEC24AO95486 1093 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 TXNP10599 105 aaKnown RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 AKT1P31749 480 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 FOXN2P32314 431 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ST13P50502 369 aaKnown RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 GEMP55040 296 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 C6orf52Q5T4I8 152 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 C6orf89Q6UWU4 347 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ATG14Q6ZNE5 492 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 CCDC149Q6ZUS6 474 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 TMEM176AQ96HP8 235 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PLEKHA8Q96JA3 519 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 APBA2Q99767 749 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 SPATA16Q9BXB7 569 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 TJP2Q9UDY2 1190 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 COPG1Q9Y678 874 aaKnown RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 TBX10O75333 385 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 HMBSP08397 361 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 RAB27AP51159 221 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 FUT2Q10981 343 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 CACHD1Q5VU97 1274 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 BROXQ5VW32 411 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ARHGAP17Q68EM7 881 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 MRNIPQ6NTE8 343 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 HDDC2Q7Z4H3 204 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 SVOPQ8N4V2 548 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 SHC3Q92529 594 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 FAM120BQ96EK7 910 aaKnown RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 AVILO75366 819 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ATG7O95352 703 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PRKAA2P54646 552 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 FRG1Q14331 258 aaKnown RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZRANB3Q5FWF4 1079 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 BPIFB6Q8NFQ5 453 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 FICDQ9BVA6 458 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PRMT7Q9NVM4 692 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PRKAG3Q9UGI9 489 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ANAPC2Q9UJX6 822 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 COG5Q9UP83 839 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P13-202ENST00000567704 ITGAVP06756 1048 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 CD151P48509 253 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 ECM1Q16610 540 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 RNF19BQ6ZMZ0 732 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 C4orf19Q8IY42 314 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 EID3Q8N140 333 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 RP9Q8TA86 221 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 CHID1Q9BWS9 393 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 IKZF4Q9H2S9 585 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 RIBC2Q9H4K1 309 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 WDCPQ9H6R7 721 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TUBA8Q9NY65 449 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 PNMA8CA0A1B0GUJ8 204 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 CHADO15335 359 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 NAMPTP43490 491 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 RGS4P49798 205 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 EFCAB12Q6NXP0 572 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 LLGL2Q6P1M3 1020 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 SLC22A9Q8IVM8 553 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 UTP15Q8TED0 518 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 OTUB1Q96FW1 271 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 ZNF317Q96PQ6 595 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 MID1IP1Q9NPA3 183 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 PTTG2Q9NZH5 202 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 GRHL1Q9NZI5 618 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TDRKHQ9Y2W6 561 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 A0A1B0GW55 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 HDAC3O15379 428 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 IDH3BO43837 385 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 ENTPD3O75355 529 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 VAPBO95292 243 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 PIK3R1P27986 724 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 FASTKD3Q14CZ7 662 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms