RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 MRGPRX3Q96LB0 322 aa17.14■□□□□ 0.33
PKD1-233ENST00000567355 SYNCQ9H7C4 482 aa17.14■□□□□ 0.33
PKD1-233ENST00000567355 FAM207AQ9NSI2 230 aaPredicted RBP17.14■□□□□ 0.33
PKD1-233ENST00000567355 RRN3Q9NYV6 651 aa17.14■□□□□ 0.33
PKD1-233ENST00000567355 TYW5A2RUC4 315 aaKnown RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 KHNYNO15037 678 aaKnown RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 CYP1A1P04798 512 aaPredicted RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 TPM2P07951 284 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 CHRNB2P17787 502 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 POLR2EP19388 210 aaKnown RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 SOX5P35711 763 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 TPMTP51580 245 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 CDR2Q01850 454 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 ARID5AQ03989 594 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 MTA1Q13330 715 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 ARID5BQ14865 1188 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 C5orf22Q49AR2 442 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 FNDC3BQ53EP0 1204 aaKnown RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 KIAA1324Q6UXG2 1013 aaKnown RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 MMS22LQ6ZRQ5 1243 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 CHSY1Q86X52 802 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 ERICH1Q86X53 443 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 CARNMT1Q8N4J0 409 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 KDM1BQ8NB78 822 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 SLC20A1Q8WUM9 679 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 SIPA1Q96FS4 1042 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 BPIFA3Q9BQP9 254 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 WSB2Q9NYS7 404 aaPredicted RBP17.13■□□□□ 0.33
PKD1-233ENST00000567355 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
PKD1-233ENST00000567355 NCOR2Q9Y618 2525 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 F5H5T6 163 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 I6L893 689 aaPredicted RBP17.12■□□□□ 0.33
PKD1-233ENST00000567355 M0QYT0 321 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 CDX4O14627 284 aaPredicted RBP17.12■□□□□ 0.33
PKD1-233ENST00000567355 GFPT2O94808 682 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 ASLP04424 464 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 TFE3P19532 575 aaPredicted RBP17.12■□□□□ 0.33
PKD1-233ENST00000567355 ABCB4P21439 1286 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 CD6P30203 668 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 CSKP41240 450 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 CXCR3P49682 368 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 IRX4P78413 519 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 FMO1Q01740 532 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 CDH18Q13634 790 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 SYCP1Q15431 976 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 PITRM1Q5JRX3 1037 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 ARTNQ5T4W7 220 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 TTC39BQ5VTQ0 682 aaPredicted RBP17.12■□□□□ 0.33
PKD1-233ENST00000567355 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 FBXL22Q6P050 247 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 SLC23A3Q6PIS1 610 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 ARCQ7LC44 396 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 PRCCQ92733 491 aaPredicted RBP17.12■□□□□ 0.33
PKD1-233ENST00000567355 EDEM2Q9BV94 578 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 FBRSQ9HAH7 460 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 PRSS16Q9NQE7 514 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 ANLNQ9NQW6 1124 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.12■□□□□ 0.33
PKD1-233ENST00000567355 KIAA1522Q9P206 1035 aaPredicted RBP17.12■□□□□ 0.33
PKD1-233ENST00000567355 TMEM59LQ9UK28 342 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 HS3ST4Q9Y661 456 aa17.12■□□□□ 0.33
PKD1-233ENST00000567355 PCDH15Q96QU1 1955 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 SYNJ2BP-COX16A0A087WUM0 186 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 OXTRP30559 389 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 PLK1P53350 603 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 NME3Q13232 169 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 AUHQ13825 339 aaKnown RBP17.11■□□□□ 0.33
PKD1-233ENST00000567355 SLC25A52Q3SY17 297 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 C2CD6Q53TS8 623 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 NAA35Q5VZE5 725 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 CXorf57Q6NSI4 855 aaKnown RBP17.11■□□□□ 0.33
PKD1-233ENST00000567355 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
PKD1-233ENST00000567355 DEFB119Q8N690 84 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 ZNF366Q8N895 744 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 CPA5Q8WXQ8 436 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 TOE1Q96GM8 510 aaKnown RBP17.11■□□□□ 0.33
PKD1-233ENST00000567355 NLRC4Q9NPP4 1024 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 COX16Q9P0S2 106 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 ITIH6Q6UXX5 1313 aa17.11■□□□□ 0.33
PKD1-233ENST00000567355 A0A1B0GVM2 712 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 TCAF2A6NFQ2 919 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 H0Y626 953 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 PAGE1O75459 146 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 SRPRAP08240 638 aaKnown RBP17.1■□□□□ 0.33
PKD1-233ENST00000567355 UNGP13051 313 aaPredicted RBP17.1■□□□□ 0.33
PKD1-233ENST00000567355 ATP1A3P13637 1013 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 MMP8P22894 467 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 FLT3P36888 993 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 STAT1P42224 750 aa17.1■□□□□ 0.33
PKD1-233ENST00000567355 CTSOP43234 321 aaPredicted RBP17.1■□□□□ 0.33
PKD1-233ENST00000567355 RPS14P62263 151 aaKnown RBP17.1■□□□□ 0.33
PKD1-233ENST00000567355 ZBTB16Q05516 673 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms