RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 DOCK4Q8N1I0 1966 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 NYNRINQ9P2P1 1898 aaKnown RBP11.67□□□□□ -0.54
LINC00562-201ENST00000566385 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 SLC12A8A0AV02 714 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 HACD1B0YJ81 288 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 E7ESA3 106 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 RASGRF2O14827 1237 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 CHADO15335 359 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 TEX28O15482 410 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 FGF18O76093 207 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 FGBP02675 491 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 TUFMP49411 452 aaKnown RBP11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ARL4CP56559 192 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ZBTB17Q13105 803 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ARHGEF18Q6ZSZ5 1173 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ZNF534Q76KX8 674 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 BZW1Q7L1Q6 419 aaKnown RBP11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ARHGAP12Q8IWW6 846 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 CYP4X1Q8N118 509 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ARHGAP18Q8N392 663 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 ZSCAN18Q8TBC5 510 aaPredicted RBP11.67□□□□□ -0.54
LINC00562-201ENST00000566385 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 TTLL2Q9BWV7 592 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 FOXP3Q9BZS1 431 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 UBE2OQ9C0C9 1292 aaKnown RBP11.67□□□□□ -0.54
LINC00562-201ENST00000566385 TBK1Q9UHD2 729 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 CHMP2BQ9UQN3 213 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 PDE4DIPQ5VU43 2346 aa11.67□□□□□ -0.54
LINC00562-201ENST00000566385 GOLGA6L7A0A1B0GV03 622 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 HMGB1P1B2RPK0 211 aaPredicted RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PPP1R12AO14974 1030 aaPredicted RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 CNTN5O94779 1100 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 URODP06132 367 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 NR1D1P20393 614 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 GCAP28676 217 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 CA8P35219 290 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 GARSP41250 739 aaKnown RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ELK3P41970 407 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ALFQ53S48 1182 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 TMEM240Q5SV17 173 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 TFAP2DQ7Z6R9 452 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PDIK1LQ8N165 341 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PYROXD1Q8WU10 500 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 DPF3Q92784 378 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 MRRFQ96E11 262 aaKnown RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ZNF512Q96ME7 567 aaPredicted RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 HERC2P3Q9BVR0 1158 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 VPS37BQ9H9H4 285 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 YIPF1Q9Y548 306 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 DOCK6Q96HP0 2047 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 DFFAO00273 331 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 EFCAB14O75071 495 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 CREB1P16220 341 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PTPN3P26045 913 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PSMB4P28070 264 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 HOXC13P31276 330 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PSEN1P49768 467 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 GABPB1Q06547 395 aaPredicted RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PPIDQ08752 370 aaKnown RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 GALNT2Q10471 571 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 EFTUD2Q15029 972 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PID1Q7Z2X4 250 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 CIR1Q86X95 450 aaPredicted RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ZNF683Q8IZ20 524 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
LINC00562-201ENST00000566385 KLHL23Q8NBE8 558 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 TLCD1Q96CP7 247 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 TMEM109Q9BVC6 243 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 SLC39A8Q9C0K1 460 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 RNF38Q9H0F5 515 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 ANAPC1Q9H1A4 1944 aa11.66□□□□□ -0.54
LINC00562-201ENST00000566385 CEP290O15078 2479 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 ZNF840PA6NDX5 716 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
LINC00562-201ENST00000566385 LILRB3O75022 631 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 CNPP09543 421 aaKnown RBP11.65□□□□□ -0.54
LINC00562-201ENST00000566385 CD68P34810 354 aaPredicted RBP11.65□□□□□ -0.54
LINC00562-201ENST00000566385 LMAN1P49257 510 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.54
LINC00562-201ENST00000566385 FPGSQ05932 587 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 TWF1Q12792 350 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 RAB33AQ14088 237 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 TRIP4Q15650 581 aaPredicted RBP11.65□□□□□ -0.54
LINC00562-201ENST00000566385 RAP1GAP2Q684P5 730 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 C3orf62Q6ZUJ4 267 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 C7orf61Q8IZ16 206 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 MPP5Q8N3R9 675 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 HDAC11Q96DB2 347 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 TBC1D31Q96DN5 1066 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 PGM2Q96G03 612 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 NOL6Q9H6R4 1146 aaKnown RBP11.65□□□□□ -0.54
LINC00562-201ENST00000566385 PRDM16Q9HAZ2 1276 aa11.65□□□□□ -0.54
LINC00562-201ENST00000566385 PLAC1Q9HBJ0 212 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms