RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CEP85LQ5SZL2 805 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 DCAF12L2Q5VW00 463 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ABLIM2Q6H8Q1 611 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 CCDC144NLQ6NUI1 221 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ARMC9Q7Z3E5 817 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 KRT28Q7Z3Y7 464 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 KDELC2Q7Z4H8 507 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 SESTD1Q86VW0 696 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 CAMK1DQ8IU85 385 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 PAQR4Q8N4S7 273 aaPredicted RBP2.64□□□□□ -1.99
SMG1-212ENST00000566328 ADPRHL1Q8NDY3 354 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 LRTOMTQ8WZ04 291 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 GPR78Q96P69 363 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 STRBPQ96SI9 672 aaKnown RBP2.64□□□□□ -1.99
SMG1-212ENST00000566328 TCF7L2Q9NQB0 619 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 C1orf112Q9NSG2 853 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 SRRM3A6NNA2 597 aaPredicted RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 VWA5AO00534 786 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 THAP12O43422 761 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 LCATP04180 440 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 SERPINB2P05120 415 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 ANXA2P07355 339 aaKnown RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 IBSPP21815 317 aaPredicted RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 CLCN5P51795 746 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 EEF1A2Q05639 463 aaKnown RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 PMPCAQ10713 525 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 TTF1Q15361 905 aaPredicted RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 ZRSR1Q15695 479 aaKnown RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 KIF19Q2TAC6 998 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 KRT71Q3SY84 523 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 TDRD12Q587J7 1177 aaKnown RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 FSCBQ5H9T9 825 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 FAXCQ5TGI0 409 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 RNF220Q5VTB9 566 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 HIST2H2BCQ6DN03 193 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 C8orf82Q6P1X6 216 aaPredicted RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 DSTYKQ6XUX3 929 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 GPSM1Q86YR5 675 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 RUNDC1Q96C34 613 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 ZNF347Q96SE7 839 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 RNF146Q9NTX7 359 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 TYW1Q9NV66 732 aaKnown RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 PLEKHB1Q9UF11 243 aaPredicted RBP2.63□□□□□ -1.99
SMG1-212ENST00000566328 B3GNT3Q9Y2A9 372 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 DTX4Q9Y2E6 619 aa2.63□□□□□ -1.99
SMG1-212ENST00000566328 SAC3D1A6NKF1 404 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 MS4A18H0YCH9 400 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 GOLIM4O00461 696 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 PPP6R2O75170 966 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 CNTN5O94779 1100 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 SP1P08047 785 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 SLC5A2P31639 672 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 DLX5P56178 289 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 GALNT3Q14435 633 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 SLC39A14Q15043 492 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 MINDY4Q4G0A6 757 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 C10orf76Q5T2E6 689 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 CXorf57Q6NSI4 855 aaKnown RBP2.62□□□□□ -1.99
SMG1-212ENST00000566328 MRNIPQ6NTE8 343 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 DARS2Q6PI48 645 aaKnown RBP2.62□□□□□ -1.99
SMG1-212ENST00000566328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMG1-212ENST00000566328 KRT27Q7Z3Y8 459 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 FAM185AQ8N0U4 392 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 MUC20Q8N307 709 aaPredicted RBP2.62□□□□□ -1.99
SMG1-212ENST00000566328 CLIP4Q8N3C7 705 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 RFLNBQ8N5W9 214 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 IGSF21Q96ID5 467 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 NUDT22Q9BRQ3 303 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.62□□□□□ -1.99
SMG1-212ENST00000566328 BRINP2Q9C0B6 783 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 DDX31Q9H8H2 851 aaKnown RBP2.62□□□□□ -1.99
SMG1-212ENST00000566328 FBXO28Q9NVF7 368 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 MAGED2Q9UNF1 606 aaPredicted RBP2.62□□□□□ -1.99
SMG1-212ENST00000566328 TNFSF13BQ9Y275 285 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 PCDHB7Q9Y5E2 793 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 MMP24Q9Y5R2 645 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 CKAP5Q14008 2032 aa2.62□□□□□ -1.99
SMG1-212ENST00000566328 CADPSQ9ULU8 1353 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 KIF3BO15066 747 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 BUB3O43684 328 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 IGLV2-11P01706 119 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 SNRNP70P08621 437 aaKnown RBP2.61□□□□□ -1.99
SMG1-212ENST00000566328 F7P08709 466 aaPredicted RBP2.61□□□□□ -1.99
SMG1-212ENST00000566328 ARP10275 920 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 ALADP13716 330 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 PDLIM4P50479 330 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 RAB27AP51159 221 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 SLC37A1P57057 533 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 MCL1Q07820 350 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 PLCB4Q15147 1175 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 CCDC6Q16204 474 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 P3H1Q32P28 736 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 PPP4R4Q6NUP7 873 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 USP17L6PQ6QN14 398 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 IGFN1Q86VF2 1251 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 TCP11L2Q8N4U5 519 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 SLC25A41Q8N5S1 370 aa2.61□□□□□ -1.99
SMG1-212ENST00000566328 CCDC150Q8NCX0 1101 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms