RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ATXN1LP0C7T5 689 aaKnown RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 CSKP41240 450 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 C21orf59P57076 290 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 KIAA0895LQ68EN5 471 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 LAYNQ6UX15 382 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 USP30Q70CQ3 517 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 TMPRSS7Q7RTY8 843 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 ELOA2Q8IYF1 753 aaPredicted RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 GALNT15Q8N3T1 639 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 CARNMT1Q8N4J0 409 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 FAM149B1Q96BN6 582 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 PRICKLE1Q96MT3 831 aaPredicted RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 CEP63Q96MT8 703 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 MIS12Q9H081 205 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 RSPH9Q9H1X1 276 aaPredicted RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 PABPC3Q9H361 631 aaKnown RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 BTBD3Q9Y2F9 522 aa17.14■□□□□ 0.33
TSR3-202ENST00000566296 FASNP49327 2511 aaKnown RBP17.14■□□□□ 0.33
TSR3-202ENST00000566296 FAM47DPA6NHR8 397 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 PMM2O15305 246 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 PCDHGA12O60330 932 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 SIN3BO75182 1162 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 MOCS3O95396 460 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 PPP1R2P41236 205 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 NNTQ13423 1086 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 HNRNPA1L2Q32P51 320 aaKnown RBP17.13■□□□□ 0.33
TSR3-202ENST00000566296 NADSYN1Q6IA69 706 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 FIBINQ8TAL6 211 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 MDM1Q8TC05 714 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 GPT2Q8TD30 523 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 DQX1Q8TE96 717 aaKnown RBP17.13■□□□□ 0.33
TSR3-202ENST00000566296 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 SKA1Q96BD8 255 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 TRIM62Q9BVG3 475 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 ACE2Q9BYF1 805 aaPredicted RBP17.13■□□□□ 0.33
TSR3-202ENST00000566296 TOR4AQ9NXH8 423 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 FBXL12Q9NXK8 326 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 GPSM3Q9Y4H4 160 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 CEP83Q9Y592 693 aa17.13■□□□□ 0.33
TSR3-202ENST00000566296 NYNRINQ9P2P1 1898 aaKnown RBP17.13■□□□□ 0.33
TSR3-202ENST00000566296 PLXNA2O75051 1894 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 KNTC1P50748 2209 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 LRRC72A6NJI9 287 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 H0Y8X5 98 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 P4HA2O15460 535 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 TNFSF14O43557 240 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 DFNA5O60443 496 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 DKK1O94907 266 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 MOCS2O96007 188 aaPredicted RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 APOEP02649 317 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 CTSKP43235 329 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 RPS24P62847 133 aaKnown RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 RACK1P63244 317 aaKnown RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 RNF219Q5W0B1 726 aaPredicted RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 C19orf48Q6RUI8 117 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 DHX40Q8IX18 779 aaKnown RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 KDM1BQ8NB78 822 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 ERCC4Q92889 916 aaPredicted RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 KAT5Q92993 513 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 DHTKD1Q96HY7 919 aaPredicted RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 FCRL2Q96LA5 508 aaPredicted RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 NUCKS1Q9H1E3 243 aaKnown RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 MTG2Q9H4K7 406 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 FTSJ1Q9UET6 329 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 TLR6Q9Y2C9 796 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 DMXL2Q8TDJ6 3036 aa17.12■□□□□ 0.33
TSR3-202ENST00000566296 URB1O60287 2271 aaKnown RBP17.12■□□□□ 0.33
TSR3-202ENST00000566296 A0A1W2PP55 124 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 A0A1W2PPC4 97 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 CAPN9O14815 690 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 GABBR2O75899 941 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 LUC7L3O95232 432 aaKnown RBP17.11■□□□□ 0.33
TSR3-202ENST00000566296 SRPRAP08240 638 aaKnown RBP17.11■□□□□ 0.33
TSR3-202ENST00000566296 IL9RQ01113 521 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 ACAP1Q15027 740 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 CST6Q15828 149 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
TSR3-202ENST00000566296 CCDC157Q569K6 752 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 MS4A13Q5J8X5 152 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 PITRM1Q5JRX3 1037 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 TAC4Q86UU9 113 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 MYO19Q96H55 970 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 SLC6A18Q96N87 628 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 OMDQ99983 421 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 TJP2Q9UDY2 1190 aa17.11■□□□□ 0.33
TSR3-202ENST00000566296 EDDM13A0A1B0GTR0 161 aa17.1■□□□□ 0.33
TSR3-202ENST00000566296 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
TSR3-202ENST00000566296 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
TSR3-202ENST00000566296 KCNK3O14649 394 aa17.1■□□□□ 0.33
TSR3-202ENST00000566296 VILLO15195 856 aa17.1■□□□□ 0.33
TSR3-202ENST00000566296 MID1O15344 667 aa17.1■□□□□ 0.33
TSR3-202ENST00000566296 PAPSS1O43252 624 aaPredicted RBP17.1■□□□□ 0.33
TSR3-202ENST00000566296 RNASEH2AO75792 299 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms