RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SLCO3A1Q9UIG8 710 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 ERVW-1Q9UQF0 538 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3DA0A087WVF3 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3IA0A087WXS9 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3EA0A087X179 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3KA0A087X1G2 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 A0A1B0GVT2 93 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 FAM170AA1A519 330 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TARSL2A2RTX5 802 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3FA6NER0 549 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 GOLGA8CPA6NN73 597 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 BECN2A8MW95 431 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 C1QTNF9BB2RNN3 333 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3LB9A6J9 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 F5H5T6 163 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 M0QYT0 321 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 HYAL3O43820 417 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 SIN3BO75182 1162 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 LUC7L3O95232 432 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 TRIM16O95361 564 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 SEMA4FO95754 770 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 IL1BP01584 269 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 IGLV3-19P01714 112 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 PROS1P07225 676 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 GLI1P08151 1106 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3HP0C7X1 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 F5P12259 2224 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 ZNF18P17022 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 CCR1P32246 355 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 MATKP42679 507 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 CTSOP43234 321 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 AFF3P51826 1226 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 OXCT1P55809 520 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 C21orf59P57076 290 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 FAM193AP78312 1265 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 PITX1P78337 314 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 SLC6A3Q01959 620 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 GRIK2Q13002 908 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 ZNF177Q13360 481 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 PDCLQ13371 301 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 NNTQ13423 1086 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 RAPGEF1Q13905 1077 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 HNRNPA1L2Q32P51 320 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 TTC31Q49AM3 519 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 VWA3BQ502W6 1294 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3GQ6DHY5 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3CQ6IPX1 549 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 IL27RAQ6UWB1 636 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 BEND5Q7L4P6 421 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 SLC47A2Q86VL8 602 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 IRF2BP1Q8IU81 584 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D3Q8IZP1 549 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 PNPLA1Q8N8W4 532 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 BIRC7Q96CA5 298 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 RPL10LQ96L21 214 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 RPRD1AQ96P16 312 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 CPXM1Q96SM3 734 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TUBGCP2Q9BSJ2 902 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 PCED1AQ9H1Q7 454 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 RSPH9Q9H1X1 276 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 CLSTN2Q9H4D0 955 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 WDCPQ9H6R7 721 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 FBRSQ9HAH7 460 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 IL21RQ9HBE5 538 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 PLCB1Q9NQ66 1216 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 TM7SF3Q9NS93 570 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 DACH1Q9UI36 760 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 INTS6Q9UL03 887 aaKnown RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 KIF26AQ9ULI4 1882 aaPredicted RBP6.63□□□□□ -1.35
TCF4-228ENST00000565393 ANKRD6Q9Y2G4 727 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 NFE2L3Q9Y4A8 694 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 SNX11Q9Y5W9 270 aa6.63□□□□□ -1.35
TCF4-228ENST00000565393 FANCMQ8IYD8 2048 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 EDDM13A0A1B0GTR0 161 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 A0A1W2PP55 124 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 GTPBP10A4D1E9 387 aaKnown RBP6.62□□□□□ -1.35
TCF4-228ENST00000565393 LRRC72A6NJI9 287 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 MID1O15344 667 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 BNIP3LO60238 219 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 CER1O95813 267 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 ERBB2P04626 1255 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 SRPRAP08240 638 aaKnown RBP6.62□□□□□ -1.35
TCF4-228ENST00000565393 PNMA6AP0CW24 399 aaPredicted RBP6.62□□□□□ -1.35
TCF4-228ENST00000565393 PDGFRAP16234 1089 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 CD27P26842 260 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 MZF1P28698 734 aaPredicted RBP6.62□□□□□ -1.35
TCF4-228ENST00000565393 ERCC5P28715 1186 aaPredicted RBP6.62□□□□□ -1.35
TCF4-228ENST00000565393 NOS2P35228 1153 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 CLCN1P35523 988 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 GALCP54803 685 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 SULT2A1Q06520 285 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 MTA1Q13330 715 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 SLC12A1Q13621 1099 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 KCNJ12Q14500 433 aa6.62□□□□□ -1.35
TCF4-228ENST00000565393 DRAP1Q14919 205 aaPredicted RBP6.62□□□□□ -1.35
TCF4-228ENST00000565393 CST6Q15828 149 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms