RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 JAK3P52333 1124 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 ARF3P61204 181 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 ARF1P84077 181 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 RNASELQ05823 741 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 CCDC15Q0P6D6 951 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 TBCEQ15813 527 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 ABHD17BQ5VST6 288 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 KYAT3Q6YP21 454 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 EXD3Q8N9H8 876 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 TOR1AIP2Q8NFQ8 470 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 SLC25A43Q8WUT9 341 aaPredicted RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 LOXL4Q96JB6 756 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 TIGD1Q96MW7 591 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 SLC25A18Q9H1K4 315 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 BRF2Q9HAW0 419 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 DUSP22Q9NRW4 184 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 SERTAD4Q9NUC0 356 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PARPBPQ9NWS1 579 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 KCND2Q9NZV8 630 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 BCCIPQ9P287 314 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-209ENST00000564255 AMFRQ9UKV5 643 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 CNOT11Q9UKZ1 510 aaKnown RBP2.83□□□□□ -1.96
CHD9-209ENST00000564255 CAMK2AQ9UQM7 478 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PIAS3Q9Y6X2 628 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 PASKQ96RG2 1323 aa2.83□□□□□ -1.96
CHD9-209ENST00000564255 C17orf100A8MU93 164 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 SUV39H1O43463 412 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 TNFSF14O43557 240 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 URODP06132 367 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 HSPA1AP0DMV8 641 aaKnown RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 HSPA1BP0DMV9 641 aaKnown RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 ZFXP17010 805 aaPredicted RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 PRKCHP24723 683 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 TM4SF1P30408 202 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 GALNSP34059 522 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 BSGP35613 385 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 LMAN2Q12907 356 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CUL4AQ13619 759 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CCNG2Q16589 344 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 SLC39A5Q6ZMH5 540 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 LCNL1Q6ZST4 164 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 SCN4BQ8IWT1 228 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 TNIP2Q8NFZ5 429 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 METTL6Q8TCB7 284 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 RUFY2Q8WXA3 655 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 HTATIP2Q9BUP3 242 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CTDSP1Q9GZU7 261 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CLPBQ9H078 707 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 MUC13Q9H3R2 512 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 MROH8Q9H579 483 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 PARD6AQ9NPB6 346 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ARHGEF3Q9NR81 526 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 SARDHQ9UL12 918 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 OSGIN2Q9Y236 505 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 TCAF1Q9Y4C2 921 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 NPIPB15A6NHN6 443 aaPredicted RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 AP4M1O00189 453 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 YY2O15391 372 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 PLOD3O60568 738 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 NR2F6P10588 404 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 MTNR1AP48039 350 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 RAE1P78406 368 aaKnown RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 BLOC1S1P78537 153 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CFHR3Q02985 330 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 GAB1Q13480 694 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CCDC96Q2M329 555 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 TIGD2Q4W5G0 525 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ANKRD16Q6P6B7 361 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 SLC22A25Q6T423 547 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ATF7IPQ6VMQ6 1270 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CCDC129Q6ZRS4 1044 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 RPAP2Q8IXW5 612 aaPredicted RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 ENDOVQ8N8Q3 282 aaKnown RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 SRFBP1Q8NEF9 429 aaKnown RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 NCSTNQ92542 709 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 C5orf34Q96MH7 638 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CENPOQ9BU64 300 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.82□□□□□ -1.96
CHD9-209ENST00000564255 SNX15Q9NRS6 342 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ANKFY1Q9P2R3 1169 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ST6GALNAC2Q9UJ37 374 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 VPS28Q9UK41 221 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 H0YIZ8 118 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ZNF213O14771 459 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ORC4O43929 436 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 CHRM2P08172 466 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 APEHP13798 732 aaKnown RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 ATF7P17544 494 aaPredicted RBP2.82□□□□□ -1.96
CHD9-209ENST00000564255 MLH1P40692 756 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ARHGAP8P85298 464 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 GOLGA8FQ08AF8 430 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 MPP3Q13368 585 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ACVR2BQ13705 512 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ENOSF1Q7L5Y1 443 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 KRT77Q7Z794 578 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 ADGRG6Q86SQ4 1221 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 RAB40AQ8WXH6 277 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 USP6NLQ92738 828 aa2.82□□□□□ -1.96
CHD9-209ENST00000564255 FBXL20Q96IG2 436 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms