RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 E9PAM4 449 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 PGRMC1O00264 195 aaKnown RBP13.32□□□□□ -0.28
SPG7-209ENST00000564047 CREB3O43889 395 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 TJP3O95049 919 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 FGGP02679 453 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 KRT10P13645 584 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 GOT1P17174 413 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 TACR2P21452 398 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 HOXC13P31276 330 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 TPI1P60174 286 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 USP4Q13107 963 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 TFDP2Q14188 446 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
SPG7-209ENST00000564047 ZNF77Q15935 545 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 FAM133BQ5BKY9 247 aaKnown RBP13.32□□□□□ -0.28
SPG7-209ENST00000564047 ANKRD20A8PQ5CZ79 823 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 FAM78AQ5JUQ0 283 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 ADGRF1Q5T601 910 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 RAP1GAP2Q684P5 730 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 NADSYN1Q6IA69 706 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 LRRC31Q6UY01 552 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 RFX8Q6ZV50 586 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 C14orf80Q86SX3 495 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 CHSY1Q86X52 802 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 FAM217AQ8IXS0 508 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 ZNF683Q8IZ20 524 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 PCDH19Q8TAB3 1148 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 TBC1D31Q96DN5 1066 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 MS4A14Q96JA4 679 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 CAPZA3Q96KX2 299 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 ASB16Q96NS5 453 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 POMKQ9H5K3 350 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 ARGLU1Q9NWB6 273 aaPredicted RBP13.32□□□□□ -0.28
SPG7-209ENST00000564047 OBP2AQ9NY56 170 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 STIM2Q9P246 746 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 PPARGC1AQ9UBK2 798 aaKnown RBP13.32□□□□□ -0.28
SPG7-209ENST00000564047 MUTYHQ9UIF7 546 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 USP15Q9Y4E8 981 aaPredicted RBP13.32□□□□□ -0.28
SPG7-209ENST00000564047 ANAPC1Q9H1A4 1944 aa13.32□□□□□ -0.28
SPG7-209ENST00000564047 RIF1Q5UIP0 2472 aaKnown RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 DRGXA6NNA5 263 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 F5H5T6 163 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 DAPK3O43293 454 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 GFRA3O60609 400 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 ZFXP17010 805 aaPredicted RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 EPHB2P29323 1055 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 GGCXP38435 758 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 CKAP4Q07065 602 aaKnown RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 KLF1Q13351 362 aaPredicted RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 SMAD4Q13485 552 aaKnown RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 DPYSQ14117 519 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 ERCC6LQ2NKX8 1250 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 C5orf22Q49AR2 442 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 KAZNQ674X7 775 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 SLC9A4Q6AI14 798 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 FBXL22Q6P050 247 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 RFX6Q8HWS3 928 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 SUGP1Q8IWZ8 645 aaKnown RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 CPXM2Q8N436 756 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 GPR161Q8N6U8 529 aaKnown RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.31□□□□□ -0.28
SPG7-209ENST00000564047 E2F7Q96AV8 911 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 MYADMQ96S97 322 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 HERPUD2Q9BSE4 406 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 HEMGNQ9BXL5 484 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 TBC1D14Q9P2M4 693 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 NEU3Q9UQ49 428 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 WDR87Q6ZQQ6 2873 aa13.31□□□□□ -0.28
SPG7-209ENST00000564047 WASH4PA8MWX3 477 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 GFRA2O00451 464 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 SLC9A3R1O14745 358 aaPredicted RBP13.3□□□□□ -0.28
SPG7-209ENST00000564047 APOL1O14791 398 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 FGF10O15520 208 aaPredicted RBP13.3□□□□□ -0.28
SPG7-209ENST00000564047 CST8O60676 142 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 LAMP2P13473 410 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 ERCC2P18074 760 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 AMPD1P23109 780 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 SLC6A4P31645 630 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 GBP2P32456 591 aaPredicted RBP13.3□□□□□ -0.28
SPG7-209ENST00000564047 CHKAP35790 457 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 LLGL1Q15334 1064 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 RABGAP1LQ5R372 815 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 OTOP3Q7RTS5 596 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 ZNF572Q7Z3I7 529 aaPredicted RBP13.3□□□□□ -0.28
SPG7-209ENST00000564047 BBS7Q8IWZ6 715 aa13.3□□□□□ -0.28
SPG7-209ENST00000564047 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms