RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SERPINB11Q96P15 392 aa21.68■■□□□ 1.06
HERC2-204ENST00000563945 TOR4AQ9NXH8 423 aa21.68■■□□□ 1.06
HERC2-204ENST00000563945 FTSJ1Q9UET6 329 aa21.68■■□□□ 1.06
HERC2-204ENST00000563945 HOOK1Q9UJC3 728 aaKnown RBP21.68■■□□□ 1.06
HERC2-204ENST00000563945 SPEGQ15772 3267 aa21.68■■□□□ 1.06
HERC2-204ENST00000563945 ADAMTS20P59510 1910 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 TRABD2BA6NFA1 517 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 RNASEH2AO75792 299 aaKnown RBP21.67■■□□□ 1.06
HERC2-204ENST00000563945 IGLV3-27P01718 113 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 SLC6A4P31645 630 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 CSKP41240 450 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 CTSKP43235 329 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 FMO5P49326 533 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 HNRNPA1L2Q32P51 320 aaKnown RBP21.67■■□□□ 1.06
HERC2-204ENST00000563945 CCDC40Q4G0X9 1142 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 COBLL1Q53SF7 1204 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 FAM133BQ5BKY9 247 aaKnown RBP21.67■■□□□ 1.06
HERC2-204ENST00000563945 ZC3H3Q8IXZ2 948 aaKnown RBP21.67■■□□□ 1.06
HERC2-204ENST00000563945 TFAP2BQ92481 460 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 SMARCE1Q969G3 411 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 SLC35C1Q96A29 364 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 FAM149B1Q96BN6 582 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 MTG2Q9H4K7 406 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 GDPD2Q9HCC8 539 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 AASDHPPTQ9NRN7 309 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 FASNP49327 2511 aaKnown RBP21.67■■□□□ 1.06
HERC2-204ENST00000563945 PLXNB3Q9ULL4 1909 aa21.67■■□□□ 1.06
HERC2-204ENST00000563945 EIF4E1BA6NMX2 242 aaKnown RBP21.66■■□□□ 1.06
HERC2-204ENST00000563945 CAPN9O14815 690 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 VILLO15195 856 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 SART1O43290 800 aaKnown RBP21.66■■□□□ 1.06
HERC2-204ENST00000563945 SIN3BO75182 1162 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 ABCB4P21439 1286 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 NNMTP40261 264 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 IL9RQ01113 521 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 CYP4F3Q08477 520 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 CST6Q15828 149 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 UBR7Q8N806 425 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 PDCD7Q8N8D1 485 aaKnown RBP21.66■■□□□ 1.06
HERC2-204ENST00000563945 ST7Q9NRC1 585 aa21.66■■□□□ 1.06
HERC2-204ENST00000563945 PTPRBP23467 1997 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 APC2O95996 2303 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 A0A1W2PPC4 97 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 TARSL2A2RTX5 802 aaKnown RBP21.65■■□□□ 1.06
HERC2-204ENST00000563945 PSMA7O14818 248 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 DKK1O94907 266 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 MOCS2O96007 188 aaPredicted RBP21.65■■□□□ 1.06
HERC2-204ENST00000563945 APOEP02649 317 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 SRPRAP08240 638 aaKnown RBP21.65■■□□□ 1.06
HERC2-204ENST00000563945 BRD2P25440 801 aaKnown RBP21.65■■□□□ 1.06
HERC2-204ENST00000563945 GALCP54803 685 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 RPS24P62847 133 aaKnown RBP21.65■■□□□ 1.06
HERC2-204ENST00000563945 NCEH1Q6PIU2 408 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 MMAAQ8IVH4 418 aaKnown RBP21.65■■□□□ 1.06
HERC2-204ENST00000563945 KDM1BQ8NB78 822 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 TRIM62Q9BVG3 475 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 NEUROG2Q9H2A3 272 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 DKK4Q9UBT3 224 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 TJP2Q9UDY2 1190 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 ERVW-1Q9UQF0 538 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 TLR6Q9Y2C9 796 aa21.65■■□□□ 1.06
HERC2-204ENST00000563945 URB1O60287 2271 aaKnown RBP21.64■■□□□ 1.06
HERC2-204ENST00000563945 EDDM13A0A1B0GTR0 161 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 A0A1W2PP55 124 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 FAM149AA5PLN7 773 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 TRIM49BA6NDI0 452 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 MID1O15344 667 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 IGHV4-34P06331 123 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 ITGAVP06756 1048 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 SLC8A1P32418 973 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 ACADSBP45954 432 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 PMS1P54277 932 aaKnown RBP21.64■■□□□ 1.05
HERC2-204ENST00000563945 SLC45A4Q5BKX6 768 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 PITRM1Q5JRX3 1037 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 NADSYN1Q6IA69 706 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 DHRS13Q6UX07 377 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 MARCH9Q86YJ5 346 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 CFAP52Q8N1V2 620 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 OR2T34Q8NGX1 318 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 DQX1Q8TE96 717 aaKnown RBP21.64■■□□□ 1.05
HERC2-204ENST00000563945 CLEC4CQ8WTT0 213 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 CEP63Q96MT8 703 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 SLC6A18Q96N87 628 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 ELF4Q99607 663 aaPredicted RBP21.64■■□□□ 1.05
HERC2-204ENST00000563945 SLC12A6Q9UHW9 1150 aa21.64■■□□□ 1.05
HERC2-204ENST00000563945 A0A1B0GTQ1 180 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 RNF225M0QZC1 329 aaPredicted RBP21.63■■□□□ 1.05
HERC2-204ENST00000563945 LDOC1O95751 146 aaPredicted RBP21.63■■□□□ 1.05
HERC2-204ENST00000563945 CD38P28907 300 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 ECT2LQ008S8 904 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 NNTQ13423 1086 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 SMAD1Q15797 465 aaKnown RBP21.63■■□□□ 1.05
HERC2-204ENST00000563945 DCAF6Q58WW2 860 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 MS4A13Q5J8X5 152 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 KCNT1Q5JUK3 1230 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 SND1Q7KZF4 910 aaKnown RBP eCLIP21.63■■□□□ 1.05
HERC2-204ENST00000563945 TMPRSS12Q86WS5 348 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 SCUBE3Q8IX30 993 aa21.63■■□□□ 1.05
HERC2-204ENST00000563945 FMR1NBQ8N0W7 255 aaPredicted RBP21.63■■□□□ 1.05
HERC2-204ENST00000563945 LRIG1Q96JA1 1093 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms