RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PRSS16Q9NQE7 514 aa18.3■□□□□ 0.52
NME3-205ENST00000563854 SAMSN1Q9NSI8 373 aaKnown RBP18.3■□□□□ 0.52
NME3-205ENST00000563854 SLC12A6Q9UHW9 1150 aa18.3■□□□□ 0.52
NME3-205ENST00000563854 FHOD1Q9Y613 1164 aa18.3■□□□□ 0.52
NME3-205ENST00000563854 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 CNOT1A5YKK6 2376 aaKnown RBP18.29■□□□□ 0.52
NME3-205ENST00000563854 ARHGAP33O14559 1287 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 OPHN1O60890 802 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 HSF2BPO75031 334 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 MOCS3O95396 460 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 IGLV3-25P01717 112 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 DNTTP04053 509 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 ABCB4P21439 1286 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 PMLP29590 882 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 CLCN1P35523 988 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 FOXC1Q12948 553 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 NME3Q13232 169 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 DRAP1Q14919 205 aaPredicted RBP18.29■□□□□ 0.52
NME3-205ENST00000563854 PTPN20Q4JDL3 420 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 GANCQ8TET4 914 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.29■□□□□ 0.52
NME3-205ENST00000563854 TAB2Q9NYJ8 693 aa18.29■□□□□ 0.52
NME3-205ENST00000563854 INTS6Q9UL03 887 aaKnown RBP18.29■□□□□ 0.52
NME3-205ENST00000563854 KCNU1A8MYU2 1149 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 ASLP04424 464 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 CSRP1P21291 193 aaKnown RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 CTSOP43234 321 aaPredicted RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 SNX16P57768 344 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 RPS14P62263 151 aaKnown RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 TAF3Q5VWG9 929 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 RNF219Q5W0B1 726 aaPredicted RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 ZNF776Q68DI1 518 aaPredicted RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 OLFML1Q6UWY5 402 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 DHX40Q8IX18 779 aaKnown RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 CADM4Q8NFZ8 388 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 LMLNQ96KR4 655 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 SLC2A13Q96QE2 648 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 SLC32A1Q9H598 525 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 FBRSQ9HAH7 460 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 LMBRD1Q9NUN5 540 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 ASNSD1Q9NWL6 643 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 KIAA1522Q9P206 1035 aaPredicted RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 SUN2Q9UH99 717 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 EIF2B4Q9UI10 523 aaKnown RBP18.28■□□□□ 0.52
NME3-205ENST00000563854 NFE2L3Q9Y4A8 694 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 PCDH15Q96QU1 1955 aa18.28■□□□□ 0.52
NME3-205ENST00000563854 A0A1B0GTW7 788 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 SIN3BO75182 1162 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 DAB1O75553 588 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 IGLV3-19P01714 112 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 GLI1P08151 1106 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 SLC2A3P11169 496 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 CEACAM1P13688 526 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 CCR1P32246 355 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 ACSL1P33121 698 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 GGCXP38435 758 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 PI4KAP42356 2102 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 BPIFB4P59827 614 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 RNASE9P60153 205 aaKnown RBP18.27■□□□□ 0.52
NME3-205ENST00000563854 KCNMA1Q12791 1236 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 GRIK2Q13002 908 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 TTC31Q49AM3 519 aaPredicted RBP18.27■□□□□ 0.52
NME3-205ENST00000563854 TCP11X2Q5H9J9 407 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 FAM71AQ8IYT1 594 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 APCDD1Q8J025 514 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 TTC17Q96AE7 1141 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 C6orf106Q9H6K1 298 aaPredicted RBP18.27■□□□□ 0.52
NME3-205ENST00000563854 ERVW-1Q9UQF0 538 aa18.27■□□□□ 0.52
NME3-205ENST00000563854 METTL12A8MUP2 240 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 TTC34A8MYJ7 566 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 M0QYT0 321 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 PDGFRAP16234 1089 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 SLC6A3Q01959 620 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 CENPCQ03188 943 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 KLHDC7AQ5VTJ3 777 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 CCAR2Q8N163 923 aaKnown RBP18.26■□□□□ 0.51
NME3-205ENST00000563854 TMEM35BQ8NCS4 154 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 DNASE2BQ8WZ79 361 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 MYO19Q96H55 970 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 RPL10LQ96L21 214 aaKnown RBP18.26■□□□□ 0.51
NME3-205ENST00000563854 MRGPRX3Q96LB0 322 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 RPRD1AQ96P16 312 aaPredicted RBP18.26■□□□□ 0.51
NME3-205ENST00000563854 BTBD1Q9H0C5 482 aa18.26■□□□□ 0.51
NME3-205ENST00000563854 CACNA1BQ00975 2339 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 SPAARA0A1B0GVQ0 90 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 FAM47DPA6NHR8 397 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 BCAT2O15382 392 aaPredicted RBP18.25■□□□□ 0.51
NME3-205ENST00000563854 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
NME3-205ENST00000563854 FSBPO95073 299 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 SEMA4FO95754 770 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 CYP11B1P15538 503 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 SPINK2P20155 84 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 EEF1GP26641 437 aaKnown RBP18.25■□□□□ 0.51
NME3-205ENST00000563854 STK19P49842 368 aaPredicted RBP18.25■□□□□ 0.51
NME3-205ENST00000563854 SULT1E1P49888 294 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 ECT2LQ008S8 904 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 SEMA3BQ13214 749 aa18.25■□□□□ 0.51
NME3-205ENST00000563854 HNRNPA1L2Q32P51 320 aaKnown RBP18.25■□□□□ 0.51
NME3-205ENST00000563854 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms