RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TANKQ92844 425 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 FRMD8Q9BZ67 464 aaPredicted RBP12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 TMEM216Q9P0N5 145 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 GNPTGQ9UJJ9 305 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 ERGIC3Q9Y282 383 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 STAM2O75886 525 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 TCEA1P23193 301 aaKnown RBP12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 GRK2P25098 689 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 QARSP47897 775 aaKnown RBP12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 NEDD8Q15843 81 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 SMUG1Q53HV7 270 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 TMEM198Q66K66 360 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 EPGNQ6UW88 154 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 SGF29Q96ES7 293 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 NPAS2Q99743 824 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 APOBEC3GQ9HC16 384 aaKnown RBP12.65□□□□□ -0.38
SCAMP2-204ENST00000563829 APOC4-APOC2K7ER74 178 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 GLRA3O75311 464 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 LRCH4O75427 683 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 CLIC3O95833 236 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 APOC2P02655 101 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 ALDOAP04075 364 aaKnown RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 MAP4P27816 1152 aaKnown RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 ADORA2AP29274 412 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 GTF2IP78347 998 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 TRPC3Q13507 836 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 PRKG1Q13976 671 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 RAB39AQ14964 217 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 CLPPQ16740 277 aaPredicted RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 CASC4Q6P4E1 433 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 SLC39A4Q6P5W5 647 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 DCAF4Q8WV16 495 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 HERC2P3Q9BVR0 1158 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 EHD1Q9H4M9 534 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 COPG2Q9UBF2 871 aa12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 CNOT11Q9UKZ1 510 aaKnown RBP12.65□□□□□ -0.39
SCAMP2-204ENST00000563829 F5H423 210 aaPredicted RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CHADO15335 359 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 UFL1O94874 794 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ERBB2P04626 1255 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CALB1P05937 261 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 NR4A1P22736 598 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 GSSP48637 474 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 DPYSQ14117 519 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 SF3B4Q15427 424 aaKnown RBP eCLIP12.64□□□□□ -0.395e-7■■■■□ 24.2
SCAMP2-204ENST00000563829 WDR78Q5VTH9 848 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CHST15Q7LFX5 561 aaPredicted RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 C14orf80Q86SX3 495 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 APBB2Q92870 758 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 NPLQ9BXD5 320 aaPredicted RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CDH19Q9H159 772 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 POU2F3Q9UKI9 436 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ACOT8O14734 319 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 KRT7P08729 469 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 GRM5P41594 1212 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 WNT7BP56706 349 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 SLC25A11Q02978 314 aaKnown RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 HADHQ16836 314 aaKnown RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 GPD1LQ8N335 351 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 PCDH20Q8N6Y1 951 aaKnown RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CCDC138Q96M89 665 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 ACO2Q99798 780 aaKnown RBP12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CDY2AQ9Y6F7 541 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 CDY1Q9Y6F8 540 aa12.64□□□□□ -0.39
SCAMP2-204ENST00000563829 SAC3D1A6NKF1 404 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 NOL3O60936 208 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 KCNH1O95259 989 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 VAPBO95292 243 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TM4SF1P30408 202 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TCF7P36402 384 aaPredicted RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 NPTX2P47972 431 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 ACOT2P49753 483 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 CRADDP78560 199 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TCP10Q12799 353 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 PHKG1Q16816 387 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 IGFN1Q86VF2 1251 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 HERC6Q8IVU3 1022 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 PGAM4Q8N0Y7 254 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TMCO5AQ8N6Q1 288 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TDRD5Q8NAT2 981 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 ATXN7L3BQ96GX2 97 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms