RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CABIN1Q9Y6J0 2220 aa17.44■□□□□ 0.38
HDGFL3-203ENST00000563404 LOC400499M0QZD8 3231 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 GOLGA8CPA6NN73 597 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 H0Y8X5 98 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 SIN3BO75182 1162 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 CSKP41240 450 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 CTSOP43234 321 aaPredicted RBP17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 CTSKP43235 329 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 RRAGAQ7L523 313 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 IGSF8Q969P0 613 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 SLC39A13Q96H72 371 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 HSFY1Q96LI6 401 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 CDC6Q99741 560 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 PABPC3Q9H361 631 aaKnown RBP17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 EBF2Q9HAK2 575 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 METTL14Q9HCE5 456 aaKnown RBP17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 XPO7Q9UIA9 1087 aaKnown RBP17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 NAALADL1Q9UQQ1 740 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 ADAMTS20P59510 1910 aa17.43■□□□□ 0.38
HDGFL3-203ENST00000563404 C10orf142B7Z368 130 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 FBXO21O94952 628 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 SMC2O95347 1197 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 RPL34P49207 117 aaKnown RBP17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 IL9RQ01113 521 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 STILQ15468 1287 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 TEAD4Q15561 434 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 HNRNPA1L2Q32P51 320 aaKnown RBP17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 MS4A13Q5J8X5 152 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 C9orf64Q5T6V5 341 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 KIAA0895LQ68EN5 471 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 DHX40Q8IX18 779 aaKnown RBP17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 SCUBE3Q8IX30 993 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 CFAP52Q8N1V2 620 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 CARNMT1Q8N4J0 409 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 HJURPQ8NCD3 748 aaPredicted RBP17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 ADAM32Q8TC27 787 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 GOLGA1Q92805 767 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 CEP63Q96MT8 703 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 KREMEN1Q96MU8 473 aa17.42■□□□□ 0.38
HDGFL3-203ENST00000563404 TTC34A8MYJ7 566 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 MID1O15344 667 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 BMP6P22004 513 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 GPD2P43304 727 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 GALCP54803 685 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 SUZ12Q15022 739 aaKnown RBP17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 CCDC40Q4G0X9 1142 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 DCAF6Q58WW2 860 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 PITRM1Q5JRX3 1037 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 SYPL2Q5VXT5 272 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 TTI2Q6NXR4 508 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 USP30Q70CQ3 517 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 TAC4Q86UU9 113 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 SLC6A18Q96N87 628 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 FBXL12Q9NXK8 326 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 MAN1B1Q9UKM7 699 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 ERVW-1Q9UQF0 538 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 TLR6Q9Y2C9 796 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 PLXNA2O75051 1894 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 APC2O95996 2303 aa17.41■□□□□ 0.38
HDGFL3-203ENST00000563404 A0A1W2PP55 124 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 FAM47DPA6NHR8 397 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 PSMA7O14818 248 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 PCDHGA12O60330 932 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 MOCS2O96007 188 aaPredicted RBP17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 ASLP04424 464 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 WNT1P04628 370 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 GRK6P43250 576 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 CCT8P50990 548 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 NNTQ13423 1086 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 ARID5BQ14865 1188 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 CST6Q15828 149 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 PRAMEF14Q5SWL7 426 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 NCEH1Q6PIU2 408 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 MMAAQ8IVH4 418 aaKnown RBP17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 ZNF557Q8N988 423 aaPredicted RBP17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 EHBP1Q8NDI1 1231 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 GANCQ8TET4 914 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 SERPINB11Q96P15 392 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 FAM129BQ96TA1 746 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 NEUROG2Q9H2A3 272 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 CYTH4Q9UIA0 394 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 SLCO3A1Q9UIG8 710 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 NCKAP1Q9Y2A7 1128 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 RAXQ9Y2V3 346 aa17.4■□□□□ 0.38
HDGFL3-203ENST00000563404 A0A1W2PPC4 97 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 FAM149AA5PLN7 773 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 WNT9AO14904 365 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 VILLO15195 856 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 P4HA2O15460 535 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 PAPSS1O43252 624 aaPredicted RBP17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 TNFSF14O43557 240 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 LUC7L3O95232 432 aaKnown RBP17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 ST8SIA6P61647 398 aa17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 RACK1P63244 317 aaKnown RBP17.39■□□□□ 0.37
HDGFL3-203ENST00000563404 PITX1P78337 314 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms