RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CFAP52Q8N1V2 620 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 GALNT15Q8N3T1 639 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 FIBINQ8TAL6 211 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 ADAM32Q8TC27 787 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 KAT5Q92993 513 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 SKA1Q96BD8 255 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 FAM149B1Q96BN6 582 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 HSFY1Q96LI6 401 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-202ENST00000562722 OMDQ99983 421 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
SF3B3-202ENST00000562722 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-202ENST00000562722 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-202ENST00000562722 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 SCML1Q9UN30 329 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 RAXQ9Y2V3 346 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 GPSM3Q9Y4H4 160 aa13.47□□□□□ -0.25
SF3B3-202ENST00000562722 MUC22E2RYF6 1773 aaPredicted RBP13.47□□□□□ -0.25
SF3B3-202ENST00000562722 A0A1W2PP55 124 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 LRRC72A6NJI9 287 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 CAPN9O14815 690 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 MID1O15344 667 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 GABBR2O75899 941 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 APOEP02649 317 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 ACAP1Q15027 740 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 CST6Q15828 149 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 COL28A1Q2UY09 1125 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 HNRNPA1L2Q32P51 320 aaKnown RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 NADSYN1Q6IA69 706 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 DBX2Q6ZNG2 339 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 MMS22LQ6ZRQ5 1243 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 USP30Q70CQ3 517 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 MMAAQ8IVH4 418 aaKnown RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 SCUBE3Q8IX30 993 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 AZIN2Q96A70 460 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 TTC17Q96AE7 1141 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 FCRL2Q96LA5 508 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 SLC6A18Q96N87 628 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 ZSWIM1Q9BR11 485 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.25
SF3B3-202ENST00000562722 AASDHPPTQ9NRN7 309 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 FTSJ1Q9UET6 329 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 NAALADL1Q9UQQ1 740 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 TLR6Q9Y2C9 796 aa13.46□□□□□ -0.25
SF3B3-202ENST00000562722 ZFYVE26Q68DK2 2539 aa13.46□□□□□ -0.26
SF3B3-202ENST00000562722 FAM149AA5PLN7 773 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 TTC34A8MYJ7 566 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 SART1O43290 800 aaKnown RBP13.45□□□□□ -0.26
SF3B3-202ENST00000562722 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 DFNA5O60443 496 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 IGHV4-34P06331 123 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 KRT5P13647 590 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 ABCB4P21439 1286 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 CTSOP43234 321 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-202ENST00000562722 CTSKP43235 329 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 PSMD8P48556 350 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 GALCP54803 685 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 RACK1P63244 317 aaKnown RBP13.45□□□□□ -0.26
SF3B3-202ENST00000562722 MS4A13Q5J8X5 152 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 PITRM1Q5JRX3 1037 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 KCNT1Q5JUK3 1230 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 NCEH1Q6PIU2 408 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 PDZD3Q86UT5 571 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 LGI2Q8N0V4 545 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 MYEOVQ96EZ4 313 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 DHTKD1Q96HY7 919 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-202ENST00000562722 NEUROG2Q9H2A3 272 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 SERGEFQ9UGK8 458 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
SF3B3-202ENST00000562722 EDDM13A0A1B0GTR0 161 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 A0A1W2PPC4 97 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 VILLO15195 856 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 LUC7L3O95232 432 aaKnown RBP13.44□□□□□ -0.26
SF3B3-202ENST00000562722 ITGAVP06756 1048 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 SRPRAP08240 638 aaKnown RBP13.44□□□□□ -0.26
SF3B3-202ENST00000562722 C7P10643 843 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 SLC8A1P32418 973 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 NUMBP49757 651 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 ECT2LQ008S8 904 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 CYP4F3Q08477 520 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 NNTQ13423 1086 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 DCAF6Q58WW2 860 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 PRAMEF14Q5SWL7 426 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 RAP1GAP2Q684P5 730 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 DHRS13Q6UX07 377 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 TAC4Q86UU9 113 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 CHSY1Q86X52 802 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 GATAD2AQ86YP4 633 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 ARHGEF19Q8IW93 802 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 OR2T34Q8NGX1 318 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 MYO19Q96H55 970 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 LMLNQ96KR4 655 aa13.44□□□□□ -0.26
SF3B3-202ENST00000562722 MRGPRX3Q96LB0 322 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms