RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 IGSF8Q969P0 613 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 BCCIPQ9P287 314 aaKnown RBP eCLIP20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 RAD54BQ9Y620 910 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 BZW2Q9Y6E2 419 aaKnown RBP20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 STON1Q9Y6Q2 735 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 FRYLO94915 3013 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 ZFHX2Q9C0A1 2572 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 TCRBV5S1A1TA0A578 114 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 HRO43593 1189 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 ALDH1A2O94788 518 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 LMNAP02545 664 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 FTLP02792 175 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 SERPING1P05155 500 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 PLEKP08567 350 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 IL12RB1P42701 662 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 IRAK1P51617 712 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 RPL7AP62424 266 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 FUT11Q495W5 492 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 FSCBQ5H9T9 825 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 TTC39BQ5VTQ0 682 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 DCUN1D2Q6PH85 259 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 PRR23BQ6ZRT6 265 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 C14orf80Q86SX3 495 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 ADIPOR2Q86V24 386 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 VSTM4Q8IW00 320 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 FAM172AQ8WUF8 416 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 CYB5D2Q8WUJ1 264 aa20.57■□□□□ 0.88
TSPAN3-210ENST00000561277 CCDC163A0A0D9SF12 145 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 PTPN9P43378 593 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 NUMBP49757 651 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 TRIM14Q14142 442 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF234Q14588 700 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 LPAL2Q16609 132 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 MBLAC2Q68D91 279 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 VPS36Q86VN1 386 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 CCAR2Q8N163 923 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 VCPIP1Q96JH7 1222 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 EPC1Q9H2F5 836 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 THAP10Q9P2Z0 257 aaPredicted RBP20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 ADAMTS1Q9UHI8 967 aa20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 SMG5Q9UPR3 1016 aaKnown RBP20.56■□□□□ 0.88
TSPAN3-210ENST00000561277 A0A1B0GVM2 712 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 A0A1W2PQF6 199 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 TCAF2A6NFQ2 919 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 AP5Z1O43299 807 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 RTN2O75298 545 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 ENDOD1O94919 500 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 GZMAP12544 262 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 POLR2EP19388 210 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 PPP1R15BQ5SWA1 713 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 KIAA1211LQ6NV74 962 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 CEP68Q76N32 757 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 STRADAQ7RTN6 431 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 KIAA0907Q7Z7F0 614 aaPredicted RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 PGBD3Q8N328 593 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 GABRG3Q99928 467 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 TRIM5Q9C035 493 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 RBSNQ9H1K0 784 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 PARVAQ9NVD7 372 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 TMEM51Q9NW97 253 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 EBF1Q9UH73 591 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 CCP110O43303 1012 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 TIMM44O43615 452 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 RPP40O75818 363 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 CNR2P34972 360 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 HDAC4P56524 1084 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 SIM2Q14190 667 aaPredicted RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 FNDC3BQ53EP0 1204 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 SERPINA13PQ6UXR4 307 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 RASSF3Q86WH2 238 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF653Q96CK0 615 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 LMLNQ96KR4 655 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 KIAA1522Q9P206 1035 aaPredicted RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 CNOT8Q9UFF9 292 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 INTS6Q9UL03 887 aaKnown RBP20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 PLA2G4CQ9UP65 541 aa20.55■□□□□ 0.88
TSPAN3-210ENST00000561277 EML5Q05BV3 1969 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 NPC1O15118 1278 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 TPM1P09493 284 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 PRKCHP24723 683 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 ZNF143P52747 638 aaPredicted RBP20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 MAMLD1Q13495 774 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 ARL13BQ3SXY8 428 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 SARM1Q6SZW1 724 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 LRRC31Q6UY01 552 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 SUMF1Q8NBK3 374 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 GAB3Q8WWW8 586 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 HAPLN3Q96S86 360 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 ARHGAP20Q9P2F6 1191 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 MYO1AQ9UBC5 1043 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 RAB23Q9ULC3 237 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 INVSQ9Y283 1065 aa20.54■□□□□ 0.88
TSPAN3-210ENST00000561277 E9PAM4 449 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 SRGAP2O75044 1071 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 ATP5BP06576 529 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 DLDP09622 509 aaKnown RBP20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 CSKP41240 450 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 STARD3Q14849 445 aa20.53■□□□□ 0.88
TSPAN3-210ENST00000561277 E2F5Q15329 346 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms