RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TRPM6Q9BX84 2022 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 COL27A1Q8IZC6 1860 aaPredicted RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 IGHV1OR15-9A0A0B4J2B8 117 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 TCRBV21S2A2A0A5A6 115 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 M0QYV0 167 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 IRAK2O43187 625 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 SART1O43290 800 aaKnown RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 FGFR1OPO95684 399 aaKnown RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 LTFP02788 710 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 CD19P15391 556 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 PRLRP16471 622 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 HLA-FP30511 346 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 HNRNPH3P31942 346 aaKnown RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 DPP6P42658 865 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 GEN1Q17RS7 908 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 PROX2Q3B8N5 592 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 MAP9Q49MG5 647 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 USP39Q53GS9 565 aaKnown RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 TCP11X2Q5H9J9 407 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 TMEM215Q68D42 235 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 ISM2Q6H9L7 571 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 KIAA1211LQ6NV74 962 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 TPGS1Q6ZTW0 290 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 NUDT18Q6ZVK8 323 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 ZNF572Q7Z3I7 529 aaPredicted RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 ANKS1BQ7Z6G8 1248 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 FMNL3Q8IVF7 1028 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 SIX6OS1Q8N1H7 587 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 IPO4Q8TEX9 1081 aaKnown RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 DDX1Q92499 740 aaKnown RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 FCRL2Q96LA5 508 aaPredicted RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 MRGPRX1Q96LB2 322 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 FAM81BQ96LP2 452 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 PRICKLE1Q96MT3 831 aaPredicted RBP7.16□□□□□ -1.26
SPG11-224ENST00000561268 TSGA10Q9BZW7 698 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 ZDHHC4Q9NPG8 344 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 APEX2Q9UBZ4 518 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 CYTH4Q9UIA0 394 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 CLEC4EQ9ULY5 219 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 PCDHGC3Q9UN70 934 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 PCDHB4Q9Y5E5 795 aa7.16□□□□□ -1.26
SPG11-224ENST00000561268 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.16□□□□□ -1.26
SPG11-224ENST00000561268 SLC12A8A0AV02 714 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 TBC1D3BA6NDS4 549 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 LGALS16A8MUM7 142 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CDX4O14627 284 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 PAPSS1O43252 624 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 MSI1O43347 362 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 GYPCP04921 128 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 NCAM1P13591 858 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 PMLP29590 882 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 SLC6A4P31645 630 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CDH5P33151 784 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 IL12RB1P42701 662 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 ACADSBP45954 432 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 SGSHP51688 502 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 COPAP53621 1224 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 STX17P56962 302 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 SHC2P98077 582 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CETN1Q12798 172 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CAMK2GQ13555 558 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 BYSLQ13895 437 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 E2F5Q15329 346 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 MAN2A1Q16706 1144 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 TSR1Q2NL82 804 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 MIIPQ5JXC2 388 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 ADGRF1Q5T601 910 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 STPG1Q5TH74 334 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 PAPD7Q5XG87 772 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 NUGGCQ68CJ6 796 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 NADSYN1Q6IA69 706 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 TCEAL6Q6IPX3 200 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 SLC23A3Q6PIS1 610 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 ZNF771Q7L3S4 317 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 HDXQ7Z353 690 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CYP2U1Q7Z449 544 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 TMEM110Q86TL2 294 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 ZNF557Q8N988 423 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 OR8K1Q8NGG5 319 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 UBA3Q8TBC4 463 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 WFDC5Q8TCV5 224 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 DQX1Q8TE96 717 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 WFIKKN2Q8TEU8 576 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CLEC4CQ8WTT0 213 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 HMGB4Q8WW32 186 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 NDRG1Q92597 394 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 TCEAL3Q969E4 200 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 MYO19Q96H55 970 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 SERPINB11Q96P15 392 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 NAPGQ99747 312 aaPredicted RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 EDEM2Q9BV94 578 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 LSM14BQ9BX40 385 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 FUT8Q9BYC5 575 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 NUCKS1Q9H1E3 243 aaKnown RBP7.15□□□□□ -1.26
SPG11-224ENST00000561268 TMEM245Q9H330 911 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CAPN10Q9HC96 672 aa7.15□□□□□ -1.26
SPG11-224ENST00000561268 CD93Q9NPY3 652 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms