RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MFSD6LQ8IWD5 586 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 COLGALT2Q8IYK4 626 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 TMEM57Q8N5G2 664 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 LINC01465Q8N7H1 131 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 KBTBD3Q8NAB2 608 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 CHST14Q8NCH0 376 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 PIGKQ92643 395 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 RSPRY1Q96DX4 576 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 MSANTD3Q96H12 275 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 ZNF668Q96K58 619 aaPredicted RBP4.2□□□□□ -1.74
HERC1-211ENST00000560983 LRRC3BQ96PB8 259 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 AGAP2Q99490 1192 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 PITHD1Q9GZP4 211 aaPredicted RBP4.2□□□□□ -1.74
HERC1-211ENST00000560983 AZI2Q9H6S1 392 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 C8orf33Q9H7E9 229 aaPredicted RBP4.2□□□□□ -1.74
HERC1-211ENST00000560983 FSCN3Q9NQT6 498 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.2□□□□□ -1.74
HERC1-211ENST00000560983 DACT1Q9NYF0 836 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 KCMF1Q9P0J7 381 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 PRG3Q9Y2Y8 225 aaPredicted RBP4.2□□□□□ -1.74
HERC1-211ENST00000560983 MIA3Q5JRA6 1907 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 LOXHD1Q8IVV2 1947 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 PTPRQQ9UMZ3 2332 aa4.2□□□□□ -1.74
HERC1-211ENST00000560983 PCNX2A6NKB5 2137 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 KIAA1217Q5T5P2 1943 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 MYH4Q9Y623 1939 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 SLC38A8A6NNN8 435 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 ZBTB5O15062 677 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 TLX3O43711 291 aaPredicted RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 CBFA2T3O75081 653 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 MOSPD3O75425 235 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 POMCP01189 267 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 RHOP08100 348 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 CT47B1P0C2W7 299 aaPredicted RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 VSIG10L2P0DP72 767 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 BCKDHBP21953 392 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 ADSSP30520 456 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 CCR2P41597 374 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 SLC26A2P50443 739 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 CLCN3P51790 818 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 KIF11P52732 1056 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 ACTR2P61160 394 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 DSC1Q08554 894 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 PON2Q15165 354 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 EPHA7Q15375 998 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 FNDC3BQ53EP0 1204 aaKnown RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 ZNF484Q5JVG2 852 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 VPS53Q5VIR6 699 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 C1QL3Q5VWW1 255 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 NAIF1Q69YI7 327 aaPredicted RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 C1orf228Q6PIY5 440 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 FAM111BQ6SJ93 734 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 PRSS55Q6UWB4 352 aaPredicted RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 RHOUQ7L0Q8 258 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 KANSL1Q7Z3B3 1105 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 MRPL10Q7Z7H8 261 aaKnown RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 MRGPRGQ86SM5 289 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 GLRX5Q86SX6 157 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 RALGPS2Q86X27 583 aaPredicted RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 DGKHQ86XP1 1220 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 LILRB2Q8N423 598 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 METTL13Q8N6R0 699 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 TTC8Q8TAM2 541 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 LNX1Q8TBB1 728 aaPredicted RBP4.19□□□□□ -1.74
HERC1-211ENST00000560983 SMARCD2Q92925 531 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 TCEAL4Q96EI5 215 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 KIF1BPQ96EK5 621 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 CLUHP3Q96NS8 147 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 TRPV4Q9HBA0 871 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 ACSS2Q9NR19 701 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 MIOSQ9NXC5 875 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 SLC8A2Q9UPR5 921 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 UBIAD1Q9Y5Z9 338 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 MYH8P13535 1937 aa4.19□□□□□ -1.74
HERC1-211ENST00000560983 WDR27A2RRH5 827 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 FAM149AA5PLN7 773 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 HEPACAM2A8MVW5 462 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 MEIS2O14770 477 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 CHADO15335 359 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 MAFGO15525 162 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 MTSS1O43312 755 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 OPHN1O60890 802 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 ATG13O75143 517 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 GJB3O75712 270 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 DNAJC8O75937 253 aaPredicted RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 CCNE2O96020 404 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 ZFYP08048 801 aaPredicted RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 IGFALSP35858 605 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 IL12RB1P42701 662 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 PTGER3P43115 390 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 OR1G1P47890 313 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 GPC3P51654 580 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 KPNA1P52294 538 aaPredicted RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 BPIFB4P59827 614 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 FCHO2Q0JRZ9 810 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 LY6DQ14210 128 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 GRM4Q14833 912 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 MYBPC3Q14896 1274 aa4.18□□□□□ -1.74
HERC1-211ENST00000560983 KARSQ15046 597 aaKnown RBP4.18□□□□□ -1.74
HERC1-211ENST00000560983 USP41Q3LFD5 358 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms