RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 EIF4HQ15056 248 aaKnown RBP10.39□□□□□ -0.75
USP3-216ENST00000559873 DPYSL2Q16555 572 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 C5orf22Q49AR2 442 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 FBXO43Q4G163 708 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 PPP6R3Q5H9R7 873 aaPredicted RBP10.39□□□□□ -0.75
USP3-216ENST00000559873 DGKKQ5KSL6 1271 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 LRRC38Q5VT99 294 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 RWDD4Q6NW29 188 aaKnown RBP10.39□□□□□ -0.75
USP3-216ENST00000559873 ZNF662Q6ZS27 426 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 MAP7D3Q8IWC1 876 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 RHOT1Q8IXI2 618 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 ETFBKMTQ8IXQ9 262 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 AHI1Q8N157 1196 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 CCAR2Q8N163 923 aaKnown RBP10.39□□□□□ -0.75
USP3-216ENST00000559873 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 CARNMT1Q8N4J0 409 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 TERB1Q8NA31 727 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 UCMAQ8WVF2 138 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 UBE2Q2Q8WVN8 375 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 IER2Q9BTL4 223 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 LTB4R2Q9NPC1 389 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 ANLNQ9NQW6 1124 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.39□□□□□ -0.75
USP3-216ENST00000559873 SLC27A6Q9Y2P4 619 aa10.39□□□□□ -0.75
USP3-216ENST00000559873 IGLV3-10A0A075B6K4 115 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 KRBA1A5PL33 1030 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 TBC1D3BA6NDS4 549 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 DRGXA6NNA5 263 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 I6L893 689 aaPredicted RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 DAPK3O43293 454 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 BUB1O43683 1085 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 BUB1BO60566 1050 aaPredicted RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 LRIG2O94898 1065 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 KAT7O95251 611 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 RARAP10276 462 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 RHOQP17081 205 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 MSNP26038 577 aaKnown RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 EPHB2P29323 1055 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 ETFBP38117 255 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 OPRD1P41143 372 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 SLC12A1Q13621 1099 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 PDK2Q15119 407 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 PON2Q15165 354 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 SMTNL2Q2TAL5 461 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 RAB6CQ53S08 254 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 TMEM196Q5HYL7 178 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 MANEALQ5VSG8 457 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 RNF43Q68DV7 783 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 TRMT11Q7Z4G4 463 aaKnown RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 SETD3Q86TU7 594 aaPredicted RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 ARFGAP1Q8N6T3 406 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 NAT16Q8N8M0 369 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 FLCNQ8NFG4 579 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 TPCN2Q8NHX9 752 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 FIBINQ8TAL6 211 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 KIAA1524Q8TCG1 905 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 HSPH1Q92598 858 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 PEBP4Q96S96 227 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 C1QTNF1Q9BXJ1 281 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 LACRTQ9GZZ8 138 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 RAB6CQ9H0N0 254 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 GPATCH2LQ9NWQ4 482 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 RCOR3Q9P2K3 495 aaPredicted RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
USP3-216ENST00000559873 TFR2Q9UP52 801 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 PPP2R2CQ9Y2T4 447 aa10.38□□□□□ -0.75
USP3-216ENST00000559873 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 CCDC66A2RUB6 948 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 TECTAO75443 2155 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 KRT1P04264 644 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 RHOCP08134 193 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 PABPC1P11940 636 aaKnown RBP10.37□□□□□ -0.75
USP3-216ENST00000559873 COMTP21964 271 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 OR1E1P30953 314 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 HOXC13P31276 330 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 SERPINB6P35237 376 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 HCAR3P49019 387 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 SGSHP51688 502 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 CDH6P55285 790 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 SEMA3BQ13214 749 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 DMC1Q14565 340 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 GAB4Q2WGN9 574 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 KCNT1Q5JUK3 1230 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 DAB2IPQ5VWQ8 1189 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 TXNDC11Q6PKC3 985 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 ZNF783Q6ZMS7 281 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 RFX8Q6ZV50 586 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 PEX26Q7Z412 305 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 C14orf80Q86SX3 495 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 C12orf40Q86WS4 652 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 ZNF683Q8IZ20 524 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 CFAP52Q8N1V2 620 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 UBL4BQ8N7F7 174 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.37□□□□□ -0.758e-6■□□□□ 9.8
USP3-216ENST00000559873 RTL3Q8N8U3 475 aaKnown RBP10.37□□□□□ -0.75
USP3-216ENST00000559873 KCTD6Q8NC69 237 aa10.37□□□□□ -0.75
USP3-216ENST00000559873 PJA1Q8NG27 643 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms