RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 COL28A1Q2UY09 1125 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 PLEKHG6Q3KR16 790 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 PREPLQ4J6C6 727 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 EXOSC6Q5RKV6 272 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 NXPE4Q6UWF7 544 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCDC73Q6ZRK6 1079 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 TOGARAM2Q6ZUX3 1019 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 HTR3DQ70Z44 454 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 RABEPKQ7Z6M1 372 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 CHPFQ8IZ52 775 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 PDZD8Q8NEN9 1154 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZNF507Q8TCN5 953 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCDC127Q96BQ5 260 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 MRGPRX1Q96LB2 322 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 GABRG3Q99928 467 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 TRIM56Q9BRZ2 755 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 XYLT2Q9H1B5 865 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 KIAA1586Q9HCI6 787 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 GMIPQ9P107 970 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 RAD54BQ9Y620 910 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 CELSR3Q9NYQ7 3312 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 CLIC2O15247 247 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 CBFA2T3O75081 653 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 NDUFS2O75306 463 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 BEST1O76090 585 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 FTH1P19P0C7X4 201 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 IRF1P10914 325 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 TYRP14679 529 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 STAT6P42226 847 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 PREPP48147 710 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 TUBP50607 506 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 SLC5A3P53794 718 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 TNNC1P63316 161 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 CEBPZQ03701 1054 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 CYP24A1Q07973 514 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 PSMD6Q15008 389 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 POU4F3Q15319 338 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 SNRNP35Q16560 246 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 ALG1LQ6GMV1 187 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 GRAMD4Q6IC98 578 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 SDE2Q6IQ49 451 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 FDX2Q6P4F2 183 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 TPGS1Q6ZTW0 290 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 EPM2AIP1Q7L775 607 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 PDZD3Q86UT5 571 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 FUKQ8N0W3 1084 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZMIZ2Q8NF64 920 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 DNASE2BQ8WZ79 361 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 UTP4Q969X6 686 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 ELMO3Q96BJ8 720 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 P2RY11Q96G91 374 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 BBS2Q9BXC9 721 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 FAM124BQ9H5Z6 455 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCDC86Q9H6F5 360 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZFYVE1Q9HBF4 777 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 COMMD8Q9NX08 183 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 RAXQ9Y2V3 346 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 GCN1Q92616 2671 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 NUMA1Q14980 2115 aa8.48□□□□□ -1.05
CTDSPL2-208ENST00000559793 NEDD8-MDP1E9PL57 170 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 SART1O43290 800 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 CACNG3O60359 315 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 TLR5O60602 858 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 CTSBP07858 339 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 ATICP31939 592 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 GRIK2Q13002 908 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 TRPC3Q13507 836 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 SYCP2LQ5T4T6 812 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 GLRX5Q86SX6 157 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 NAXDQ8IW45 347 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 PDILTQ8N807 584 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 MDM1Q8TC05 714 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 HNRNPLLQ8WVV9 542 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 XPO6Q96QU8 1125 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 CGRRF1Q99675 332 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 SMOQ99835 787 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 MED10Q9BTT4 135 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 SDCBP2Q9H190 292 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 SMYD3Q9H7B4 428 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 IL21RQ9HBE5 538 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 CYP4F12Q9HCS2 524 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 DMAP1Q9NPF5 467 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 ITM2CQ9NQX7 267 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 AGPAT3Q9NRZ7 376 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 OSER1Q9NX31 292 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 WSB2Q9NYS7 404 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 KIAA1522Q9P206 1035 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 WDR35Q9P2L0 1181 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 FBXO10Q9UK96 956 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 PCOLCE2Q9UKZ9 415 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 SHROOM3Q8TF72 1996 aa8.47□□□□□ -1.05
CTDSPL2-208ENST00000559793 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
CTDSPL2-208ENST00000559793 A0A1B0GTW7 788 aa8.46□□□□□ -1.06
CTDSPL2-208ENST00000559793 VPS37CA5D8V6 355 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-208ENST00000559793 KCNJ18B7U540 433 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms