RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 MTHFD1LQ6UB35 978 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PTCHD4Q6ZW05 846 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 IKBIPQ70UQ0 350 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 MON1AQ86VX9 555 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 ADSSL1Q8N142 457 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 VPS52Q8N1B4 723 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 FAM109AQ8N4B1 249 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 ZNF276Q8N554 614 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 SRBD1Q8N5C6 995 aaKnown RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 LSMEM1Q8N8F7 131 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 LSM14AQ8ND56 463 aaKnown RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 BHLHE22Q8NFJ8 381 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 TNIP2Q8NFZ5 429 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 OR52L2PQ8NGH6 319 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 CNOT9Q92600 299 aaKnown RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 USP6NLQ92738 828 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 SMARCE1Q969G3 411 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 KLHL29Q96CT2 875 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 RSPRY1Q96DX4 576 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PRR11Q96HE9 360 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 NAF1Q96HR8 494 aaKnown RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PGBD1Q96JS3 809 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 C20orf173Q96LM9 149 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 C5orf34Q96MH7 638 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 YME1L1Q96TA2 773 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 SLF1Q9BQI6 1058 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 HTATIP2Q9BUP3 242 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 ELOVL1Q9BW60 279 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PHF7Q9BWX1 381 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 USP44Q9H0E7 712 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 SMARCAD1Q9H4L7 1026 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PRDM13Q9H4Q3 707 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 SLC32A1Q9H598 525 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 CDCP1Q9H5V8 836 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 KCNK9Q9NPC2 374 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 BEX4Q9NWD9 120 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PPP1R14DQ9NXH3 145 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 NKIRAS2Q9NYR9 191 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 IL1RAPL1Q9NZN1 696 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 EHD3Q9NZN3 535 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 KCND2Q9NZV8 630 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 DKK3Q9UBP4 350 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 ZNF70Q9UC06 446 aaPredicted RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 LIMA1Q9UHB6 759 aaKnown RBP2.5□□□□□ -2.01
GABPB1-209ENST00000559100 AMFRQ9UKV5 643 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 SARDHQ9UL12 918 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PSAT1Q9Y617 370 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 PIAS3Q9Y6X2 628 aa2.5□□□□□ -2.01
GABPB1-209ENST00000559100 A0A1W2PRQ8 180 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 PER2O15055 1255 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 MUSKO15146 869 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 VILLO15195 856 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 STRNO43815 780 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 HBP1O60381 514 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 PLOD3O60568 738 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 URI1O94763 535 aaPredicted RBP2.49□□□□□ -2.01
GABPB1-209ENST00000559100 DNTTP04053 509 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 APOA4P06727 396 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 CYP3A4P08684 503 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 NPSP0C0P6 89 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 EBLN1P0CF75 366 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 NDUFB7P17568 137 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 MATN1P21941 496 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 TGM1P22735 817 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 GSTM2P28161 218 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 GCH1P30793 250 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 MAPK4P31152 587 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 ABCD1P33897 745 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 HNF1BP35680 557 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 BMPR1AP36894 532 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 ARL1P40616 181 aaPredicted RBP2.49□□□□□ -2.01
GABPB1-209ENST00000559100 VPS41P49754 854 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 RPS6KA3P51812 740 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 EIF3BP55884 814 aaKnown RBP2.49□□□□□ -2.01
GABPB1-209ENST00000559100 NLRP5P59047 1200 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 UFM1P61960 85 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 CREB5Q02930 508 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 PRPF4BQ13523 1007 aaKnown RBP2.49□□□□□ -2.01
GABPB1-209ENST00000559100 TP53BP2Q13625 1128 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 BMPR2Q13873 1038 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 BYSLQ13895 437 aaKnown RBP2.49□□□□□ -2.01
GABPB1-209ENST00000559100 PLCB4Q15147 1175 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 MED22Q15528 200 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 CNGA3Q16281 694 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 FAM187BQ17R55 369 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 AP5B1Q2VPB7 878 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 TBC1D25Q3MII6 688 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 GXYLT1Q4G148 440 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 TIGD2Q4W5G0 525 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 SLC30A6Q6NXT4 461 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 ZNF585AQ6P3V2 769 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 TMEM154Q6P9G4 183 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 TMEM88Q6PEY1 159 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 KIRREL2Q6UWL6 708 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 HTR3DQ70Z44 454 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 BRSK2Q8IWQ3 736 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 RPAP2Q8IXW5 612 aaPredicted RBP2.49□□□□□ -2.01
GABPB1-209ENST00000559100 GHDCQ8N2G8 530 aa2.49□□□□□ -2.01
GABPB1-209ENST00000559100 FRMD1Q8N878 549 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms