RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZNF18P17022 549 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 CDK11BP21127 795 aaKnown RBP18.2■□□□□ 0.5
SMAD3-210ENST00000559092 SOX5P35711 763 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 OXCT1P55809 520 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 JAM2P57087 298 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 POLR2FP61218 127 aaKnown RBP18.2■□□□□ 0.5
SMAD3-210ENST00000559092 ZBTB16Q05516 673 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 SLC12A1Q13621 1099 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 ARID5BQ14865 1188 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 NCAPHQ15003 741 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 RABGAP1LQ5R372 815 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 ACBD5Q5T8D3 534 aaPredicted RBP18.2■□□□□ 0.5
SMAD3-210ENST00000559092 TAF3Q5VWG9 929 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 SLC23A3Q6PIS1 610 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 ARCQ7LC44 396 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 CADM4Q8NFZ8 388 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 ERLEC1Q96DZ1 483 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 PGAP3Q96FM1 320 aaPredicted RBP18.2■□□□□ 0.5
SMAD3-210ENST00000559092 NPY6RQ99463 290 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 EDEM2Q9BV94 578 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 TMEM74BQ9NUR3 256 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 STAP1Q9ULZ2 295 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 PAXBP1Q9Y5B6 917 aa18.2■□□□□ 0.5
SMAD3-210ENST00000559092 SPAG17Q6Q759 2223 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 H0Y626 953 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 M0QYT0 321 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 ACADMP11310 421 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 HLA-EP13747 358 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 ITPKAP23677 461 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 CSKP41240 450 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 STAT1P42224 750 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 TPMTP51580 245 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 ST8SIA6P61647 398 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 IRX4P78413 519 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 TYRO3Q06418 890 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 NME3Q13232 169 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 SYCP1Q15431 976 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 TRIM61Q5EBN2 209 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 FSCBQ5H9T9 825 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 SYCP2LQ5T4T6 812 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 ARMCX6Q7L4S7 300 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 XYLT1Q86Y38 959 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 TOE1Q96GM8 510 aaKnown RBP18.19■□□□□ 0.5
SMAD3-210ENST00000559092 SPAG5Q96R06 1193 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 ERGIC2Q96RQ1 377 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 PPP1R9BQ96SB3 815 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 NUP58Q9BVL2 599 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 NUSAP1Q9BXS6 441 aaKnown RBP18.19■□□□□ 0.5
SMAD3-210ENST00000559092 WSB2Q9NYS7 404 aaPredicted RBP18.19■□□□□ 0.5
SMAD3-210ENST00000559092 NOCTQ9UK39 431 aaKnown RBP18.19■□□□□ 0.5
SMAD3-210ENST00000559092 INTS6Q9UL03 887 aaKnown RBP18.19■□□□□ 0.5
SMAD3-210ENST00000559092 ABCA7Q8IZY2 2146 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 EML5Q05BV3 1969 aa18.19■□□□□ 0.5
SMAD3-210ENST00000559092 SYNJ2BP-COX16A0A087WUM0 186 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 PATE3B3GLJ2 98 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 GFPT2O94808 682 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 SRPRAP08240 638 aaKnown RBP18.18■□□□□ 0.5
SMAD3-210ENST00000559092 MMEP08473 750 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 CXCR3P49682 368 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 KLK7P49862 253 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 PLK1P53350 603 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 RNASE9P60153 205 aaKnown RBP18.18■□□□□ 0.5
SMAD3-210ENST00000559092 NOMO3P69849 1222 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 CDR2Q01850 454 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 UBXN1Q04323 297 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 AUHQ13825 339 aaKnown RBP18.18■□□□□ 0.5
SMAD3-210ENST00000559092 DUOXA1Q1HG43 343 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 SLC25A52Q3SY17 297 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 PITRM1Q5JRX3 1037 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 WDR45BQ5MNZ6 344 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 BRMS1LQ5PSV4 323 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 FBXL22Q6P050 247 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 TRIM72Q6ZMU5 477 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 SND1Q7KZF4 910 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMAD3-210ENST00000559092 NEK11Q8NG66 645 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 CPA5Q8WXQ8 436 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 BPIFA3Q9BQP9 254 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 PCED1AQ9H1Q7 454 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 TMEM9BQ9NQ34 198 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 PRSS16Q9NQE7 514 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 COX16Q9P0S2 106 aa18.18■□□□□ 0.5
SMAD3-210ENST00000559092 LAMA1P25391 3075 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 A0A1B0GVM2 712 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 MED19A0JLT2 244 aaPredicted RBP18.17■□□□□ 0.5
SMAD3-210ENST00000559092 TCAF2A6NFQ2 919 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 EPHB6O15197 1021 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 CYP1A1P04798 512 aaPredicted RBP18.17■□□□□ 0.5
SMAD3-210ENST00000559092 SERPINF2P08697 491 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 ECT2LQ008S8 904 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 C5orf22Q49AR2 442 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 FAM102AQ5T9C2 384 aaPredicted RBP18.17■□□□□ 0.5
SMAD3-210ENST00000559092 DAB2IPQ5VWQ8 1189 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 APTXQ7Z2E3 356 aaKnown RBP18.17■□□□□ 0.5
SMAD3-210ENST00000559092 SLC41A1Q8IVJ1 513 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 CCAR2Q8N163 923 aaKnown RBP18.17■□□□□ 0.5
SMAD3-210ENST00000559092 DEFB119Q8N690 84 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 MYO19Q96H55 970 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 MRGPRX3Q96LB0 322 aa18.17■□□□□ 0.5
SMAD3-210ENST00000559092 PCMTD1Q96MG8 357 aaPredicted RBP18.17■□□□□ 0.5
SMAD3-210ENST00000559092 HSPA12BQ96MM6 686 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms